ENSDARG00000001578


Danio rerio

Features
Gene ID: ENSDARG00000001578
  
Biological name :echs1
  
Synonyms : echs1 / enoyl CoA hydratase, short chain, 1, mitochondrial
  
Possible biological names infered from orthology : Enoyl-CoA hydratase, mitochondrial / enoyl-CoA hydratase, short chain 1 / P30084 / Q8BH95
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 24579108
Gene end: 24582236
  
Corresponding Affymetrix probe sets: Dr.7863.1.A1_at (Zebrafish Array)   NM_001004529_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000001565
NCBI entrez gene - 368912     See in Manteia.
RefSeq - NM_001004529
RefSeq Peptide - NP_001004529
swissprot - Q7ZZ04
ZFIN ID - ZDB-GENE-030616-617
Ensembl - ENSDARG00000001578
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ECHS1ENSGALG00000024271Gallus gallus
 ECHS1ENSG00000127884Homo sapiens
 Echs1ENSMUSG00000025465Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
auh / AU RNA binding protein/enoyl-CoA hydratase / Q13825* / AU RNA binding methylglutaconyl-CoA hydratase*ENSDARG0000004297531
echdc2 / enoyl CoA hydratase domain containing 2 / Q3TLP5* / Q86YB7* / Enoyl-CoA hydratase domain-containing protein 2, mitochondrial *ENSDARG0000001660730
zgc:101569ENSDARG0000003887625
ech1 / enoyl CoA hydratase 1, peroxisomal / O35459* / Q13011* / enoyl-CoA hydratase 1* / Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial *ENSDARG0000001291523
cdyl / chromodomain protein, Y-like / CDY1* / CDY2B* / CDY1B* / CDY2A* / Q9Y6F8* / Q9WTK2* / Q9Y232* / Q9Y6F7* / chromodomain Y like* / chromodomain Y-linked 1* / chromodomain Y-linked 2B* ...ENSDARG0000003898523
eci2 / enoyl-CoA delta isomerase 2 / Eci3* / Q9WUR2* / O75521* / Q78JN3* / Enoyl-CoA delta isomerase 3, peroxisomal * / Enoyl-CoA delta isomerase 2, mitochondrial *ENSDARG0000010241223


Protein motifs (from Interpro)
Interpro ID Name
 IPR001753  Enoyl-CoA hydratase/isomerase
 IPR014748  Enoyl-CoA hydratase, C-terminal
 IPR018376  Enoyl-CoA hydratase/isomerase, conserved site
 IPR029045  ClpP/crotonase-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006635 fatty acid beta-oxidation IBA
 biological_processGO:0008152 metabolic process IEA
 cellular_componentGO:0005739 mitochondrion IBA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004300 enoyl-CoA hydratase activity IBA


Pathways (from Reactome)
Pathway description
Beta oxidation of lauroyl-CoA to decanoyl-CoA-CoA
Beta oxidation of decanoyl-CoA to octanoyl-CoA-CoA
Beta oxidation of octanoyl-CoA to hexanoyl-CoA
Beta oxidation of hexanoyl-CoA to butanoyl-CoA
Beta oxidation of butanoyl-CoA to acetyl-CoA


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000001578 echs1 / enoyl CoA hydratase, short chain, 1, mitochondrial / P30084* / Q8BH95* / enoyl-CoA hydratase, short chain 1* / Enoyl-CoA hydratase, mitochondrial *  / complex






 

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