ENSDARG00000001721


Danio rerio
phospholipaseotolithoc90processdomainphospholipidmetaboliclipidcatabolicdevelopmentarachidonicacidsecretionextracellularregionactivitycalciumionbindingorganhead

Features
Gene ID: ENSDARG00000001721
  
Biological name :oc90
  
Synonyms : oc90 / otoconin 90
  
Possible biological names infered from orthology : AC100868.1 / Mus musculus otoconin 90 (Oc90), transcript variant 2, mRNA. / Q02509 / Q9Z0L3
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 42942552
Gene end: 42960353
  
Corresponding Affymetrix probe sets: Dr.8453.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000089075
Ensembl peptide - ENSDARP00000118251
Ensembl peptide - ENSDARP00000113486
NCBI entrez gene - 568941     See in Manteia.
RefSeq - NM_001080192
RefSeq Peptide - NP_001073661
swissprot - E9QJQ8
swissprot - E9QJK8
swissprot - F1QH90
ZFIN ID - ZDB-GENE-070912-300
Ensembl - ENSDARG00000001721
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000030128Gallus gallus
 AC100868.1ENSG00000258417Homo sapiens
 OC90ENSG00000253117Homo sapiens
 Oc90ENSMUSG00000015001Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pla2g1b / phospholipase A2, group IB (pancreas) / Q9Z0Y2* / P04054* / Phospholipase A2 * / phospholipase A2 group IB*ENSDARG000000091534
zgc:92162 / O15496* / Q9QXX3* / PLA2G10* / phospholipase A2 group X*ENSDARG000000993444


Protein motifs (from Interpro)
Interpro ID Name
 IPR001211  Phospholipase A2
 IPR016090  Phospholipase A2 domain


Gene Ontology (GO)
cellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processanatomical structure developmentmacromolecule localizationestablishment of localizationcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processanatomical structure developmentmacromolecule localizationestablishment of localizationcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processanatomical structure developmentmacromolecule localizationestablishment of localizationcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processanatomical structure developmentmacromolecule localizationestablishment of localizationcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processanatomical structure developmentmacromolecule localizationestablishment of localizationcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processanatomical structure developmentmacromolecule localizationestablishment of localizationcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processanatomical structure developmentmacromolecule localizationestablishment of localizationcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processanatomical structure developmentmacromolecule localizationestablishment of localizationcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processanatomical structure developmentmacromolecule localizationestablishment of localizationcellular metabolic processprimary metabolic processorganic substance metabolic processcatabolic processanatomical structure developmentmacromolecule localizationestablishment of localizationcellular metabolic pcellular metabolic processprimary metabolic prprimary metabolic processorganic substance meorganic substance metabolic processcatabolic processcatabolic processanatomical structureanatomical structure developmentmacromolecule localimacromolecule localizationestablishment of locestablishment of localization
hydrolase activityion bindinghydrolase activityion bindinghydrolase activityion bindinghydrolase activityion bindinghydrolase activityion bindinghydrolase activityion bindinghydrolase activityion bindinghydrolase activityion bindinghydrolase activityion bindinghydrolase activityion bindinghydrolase activityhydrolase activityion bindingion binding
extracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular region
TypeGO IDTermEv.Code
 biological_processGO:0006644 phospholipid metabolic process IEA
 biological_processGO:0016042 lipid catabolic process IEA
 biological_processGO:0048840 otolith development IMP
 biological_processGO:0050482 arachidonic acid secretion IEA
 cellular_componentGO:0005576 extracellular region IEA
 molecular_functionGO:0004623 phospholipase A2 activity IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000559 otolith organ otolith organ has fewer parts of type otolith , abnormal
otolith organ altered number of otolith , abnormal
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 ZFA:0001114 head head decreased size , abnormal
Show

 ZFA:0001617 otolith otolith decreased size , abnormal
otolith aplastic , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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