ENSDARG00000003381


Danio rerio
bindingexocytosiscalciumdomainproteinvesiclecrab-bindingsynaptotagmin-likeintracellulartransportfusionregulationion-dependention-regulatedneurotransmitterplasmamembranesynapseexocyticpresynapseioncalcium-dependentphospholipidrabgtpasesyntaxinclathrin

Features
Gene ID: ENSDARG00000003381
  
Biological name :si:ch211-266g18.6
  
Synonyms : si:ch211-266g18.6
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 15388479
Gene end: 15410985
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000052438
NCBI entrez gene - 565707     See in Manteia.
RefSeq - XM_688977
swissprot - F1QR91
ZFIN ID - ZDB-GENE-131121-599
Ensembl - ENSDARG00000003381
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sytl2b / synaptotagmin-like 2b / SYTL2* / Q9HCH5* / Q99N50* / synaptotagmin like 2* / Synaptotagmin-like protein 2 *ENSDARG0000007543628
sytl1 / synaptotagmin-like 1 / Q8IYJ3*ENSDARG0000007009424
sytl5 / synaptotagmin-like 5 / Q80T23* / Q8TDW5*ENSDARG0000006213523
sytl4 / synaptotagmin-like 4 / Q96C24* / Q9R0Q1*ENSDARG0000010243323
sytl2a / synaptotagmin-like 2a / SYTL2* / Q9HCH5* / synaptotagmin like 2*ENSDARG0000006195618
sytl3 / synaptotagmin-like 3 / Q4VX76* / Q99N48* / Synaptotagmin-like protein 3 *ENSDARG0000004346813
doc2b / double C2-like domains, beta / P70169* / double C2 domain beta* / Double C2-like domain-containing protein beta *ENSDARG0000008829312
rph3ab / rabphilin 3A homolog (mouse), b / RPH3A* / Q9Y2J0* / rabphilin 3A*ENSDARG0000010549012
si:dkey-93n13.3 / DOC2A* / Q14183* / Q7TNF0* / double C2 domain alpha* / Double C2-like domain-containing protein alpha *ENSDARG0000007873610
doc2d / double C2-like domains, delta / Doc2g*ENSDARG0000007996210
rph3aa / rabphilin 3A homolog (mouse), a / RPH3A* / Q9Y2J0* / rabphilin 3A*ENSDARG000000634364


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR010911  Rab-binding domain
 IPR028378  Synaptotagmin-like protein 1


Gene Ontology (GO)
macromolecule localizationestablishment of localizationcellular localizationcellular component organizationcell communicationregulation of biological qualitymacromolecule localizationestablishment of localizationcellular localizationcellular component organizationcell communicationregulation of biological qualitymacromolecule localizationestablishment of localizationcellular localizationcellular component organizationcell communicationregulation of biological qualitymacromolecule localizationestablishment of localizationcellular localizationcellular component organizationcell communicationregulation of biological qualitymacromolecule localizationestablishment of localizationcellular localizationcellular component organizationcell communicationregulation of biological qualitymacromolecule localizationestablishment of localizationcellular localizationcellular component organizationcell communicationregulation of biological qualitymacromolecule localizationestablishment of localizationcellular localizationcellular component organizationcell communicationregulation of biological qualitymacromolecule localizationestablishment of localizationcellular localizationcellular component organizationcell communicationregulation of biological qualitymacromolecule localizationestablishment of localizationcellular localizationcellular component organizationcell communicationregulation of biological qualitymacromolecule localizationestablishment of localizationcellular localizationcellular component organizationcell communicationregulation of biological qualitymacromolecule localizatmacromolecule localizationestablishment of localiestablishment of localizationcellular localizationcellular localizationcellular component orgacellular component organizationcell communicationcell communicationregulation of biologicaregulation of biological quality
ion bindinglipid bindingprotein bindingion bindinglipid bindingprotein bindingion bindinglipid bindingprotein bindingion bindinglipid bindingprotein bindingion bindinglipid bindingprotein bindingion bindinglipid bindingprotein bindingion bindinglipid bindingprotein bindingion bindinglipid bindingprotein bindingion bindinglipid bindingprotein bindingion bindinglipid bindingprotein bindingion bindingion bindinglipid bindinglipid bindingprotein bindingprotein binding
cellmembranesynapseorganellecellmembranesynapseorganellecellmembranesynapseorganellecellmembranesynapseorganellecellmembranesynapseorganellecellmembranesynapseorganellecellmembranesynapseorganellecellmembranesynapseorganellecellmembranesynapseorganellecellmembranesynapseorganellecellcellmembranemembranesynapsesynapseorganelleorganelle
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0006887 exocytosis IEA
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0017158 regulation of calcium ion-dependent exocytosis IBA
 biological_processGO:0048791 calcium ion-regulated exocytosis of neurotransmitter IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0070382 exocytic vesicle IBA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0005509 calcium ion binding IBA
 molecular_functionGO:0005544 calcium-dependent phospholipid binding IBA
 molecular_functionGO:0017137 Rab GTPase binding IEA
 molecular_functionGO:0019905 syntaxin binding IBA
 molecular_functionGO:0030276 clathrin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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