ENSDARG00000043468


Danio rerio

Features
Gene ID: ENSDARG00000043468
  
Biological name :sytl3
  
Synonyms : synaptotagmin-like 3 / sytl3
  
Possible biological names infered from orthology : Q4VX76 / Q99N48 / Synaptotagmin-like protein 3
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 13533544
Gene end: 13565720
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000114735
NCBI entrez gene - 101882017     See in Manteia.
swissprot - F1QFP0
ZFIN ID - ZDB-GENE-040724-150
Ensembl - ENSDARG00000043468
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SYTL3ENSGALG00000013741Gallus gallus
 SYTL3ENSG00000164674Homo sapiens
 Sytl3ENSMUSG00000041831Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sytl5 / synaptotagmin-like 5 / Q80T23* / Q8TDW5*ENSDARG0000006213523
sytl4 / synaptotagmin-like 4 / Q96C24* / Q9R0Q1*ENSDARG0000010243323
sytl2b / synaptotagmin-like 2b / SYTL2* / Q9HCH5* / Q99N50* / synaptotagmin like 2* / Synaptotagmin-like protein 2 *ENSDARG0000007543620
si:ch211-266g18.6ENSDARG0000000338118
sytl1 / synaptotagmin-like 1 / Q8IYJ3*ENSDARG0000007009418
rph3ab / rabphilin 3A homolog (mouse), b / RPH3A* / Q9Y2J0* / rabphilin 3A*ENSDARG0000010549016
doc2b / double C2-like domains, beta / P70169* / double C2 domain beta* / Double C2-like domain-containing protein beta *ENSDARG0000008829314
si:dkey-93n13.3 / DOC2A* / Q14183* / Q7TNF0* / double C2 domain alpha* / Double C2-like domain-containing protein alpha *ENSDARG0000007873613
sytl2a / synaptotagmin-like 2a / SYTL2* / Q9HCH5* / synaptotagmin like 2*ENSDARG0000006195612
doc2d / double C2-like domains, delta / Doc2g*ENSDARG0000007996210
rph3aa / rabphilin 3A homolog (mouse), a / RPH3A* / Q9Y2J0* / rabphilin 3A*ENSDARG000000634363


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR010911  Rab-binding domain
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR028702  Synaptotagmin-like protein 5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0006887 exocytosis IEA
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0017158 regulation of calcium ion-dependent exocytosis IBA
 biological_processGO:0048791 calcium ion-regulated exocytosis of neurotransmitter IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0070382 exocytic vesicle IBA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0005509 calcium ion binding IBA
 molecular_functionGO:0005544 calcium-dependent phospholipid binding IBA
 molecular_functionGO:0017137 Rab GTPase binding IEA
 molecular_functionGO:0019905 syntaxin binding IBA
 molecular_functionGO:0030276 clathrin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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