ENSDARG00000004051


Danio rerio

Features
Gene ID: ENSDARG00000004051
  
Biological name :CR354540.1
  
Synonyms : CR354540.1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 58270474
Gene end: 58289847
  
Corresponding Affymetrix probe sets: Dr.16187.1.A1_at (Zebrafish Array)   DrAffx.2.66.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000007208
NCBI entrez gene - 559097     See in Manteia.
swissprot - E7FCW9
Ensembl - ENSDARG00000004051
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cyp7a1 / cytochrome P450, family 7, subfamily A, polypeptide 1 / P22680* / Q64505* / Cholesterol 7-alpha-monooxygenase * / cytochrome P450 family 7 subfamily A member 1*ENSDARG0000006901843
cyp7b1 / cytochrome P450, family 7, subfamily B, polypeptide 1 / O75881* / Q60991* / 25-hydroxycholesterol 7-alpha-hydroxylase * / cytochrome P450 family 7 subfamily B member 1*ENSDARG0000000885837
cyp8b1 / cytochrome P450, family 8, subfamily B, polypeptide 1 / Q9UNU6* / cytochrome P450 family 8 subfamily B member 1*ENSDARG0000005306833
cyp8b2 / cytochrome P450, family 8, subfamily B, polypeptide 2 / CYP8B1* / Q9UNU6* / cytochrome P450 family 8 subfamily B member 1*ENSDARG0000009755632
cyp8b3 / cytochrome P450, family 8, subfamily B, polypeptide 3 / CYP8B1* / Q9UNU6* / cytochrome P450 family 8 subfamily B member 1*ENSDARG0000009755932
ptgis / F1RE08 / prostaglandin I2 (prostacyclin) synthase / O35074* / Q16647* / prostaglandin I2 synthase*ENSDARG0000006009425
cyp39a1 / cytochrome P450, family 39, subfamily A, polypeptide 1 / Q9NYL5* / cytochrome P450 family 39 subfamily A member 1*ENSDARG0000001798220


Protein motifs (from Interpro)
Interpro ID Name
 IPR001128  Cytochrome P450
 IPR002403  Cytochrome P450, E-class, group IV
 IPR024204  Cytochrome P450, cholesterol 7-alpha-monooxygenase-type
 IPR030681  Cholesterol 7-alpha-monooxygenase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006699 bile acid biosynthetic process IEA
 biological_processGO:0006707 cholesterol catabolic process IEA
 biological_processGO:0042632 cholesterol homeostasis IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:0071333 cellular response to glucose stimulus IEA
 cellular_componentGO:0005623 cell IEA
 molecular_functionGO:0004497 monooxygenase activity IEA
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0008123 cholesterol 7-alpha-monooxygenase activity IEA
 molecular_functionGO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
 molecular_functionGO:0020037 heme binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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