ENSDARG00000005057


Danio rerio

Features
Gene ID: ENSDARG00000005057
  
Biological name :dimt1l
  
Synonyms : DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) / dimt1l
  
Possible biological names infered from orthology : DIM1 dimethyladenosine transferase 1 homolog / DIMT1 / Probable dimethyladenosine transferase / Q9D0D4 / Q9UNQ2
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 17184602
Gene end: 17193041
  
Corresponding Affymetrix probe sets: Dr.16815.1.A1_at (Zebrafish Array)   Dr.23895.1.A1_at (Zebrafish Array)   NM_001003556_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000050227
Ensembl peptide - ENSDARP00000117451
NCBI entrez gene - 445162     See in Manteia.
RefSeq - NM_001003556
RefSeq Peptide - NP_001003556
swissprot - F1QJ20
swissprot - B0S688
ZFIN ID - ZDB-GENE-040801-75
Ensembl - ENSDARG00000005057
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DIMT1ENSGALG00000020569Gallus gallus
 DIMT1ENSG00000086189Homo sapiens
 Dimt1ENSMUSG00000021692Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tfb1m / transcription factor B1, mitochondrial / Q8JZM0* / Q8WVM0* / Dimethyladenosine transferase 1, mitochondrial *ENSDARG0000004072721


Protein motifs (from Interpro)
Interpro ID Name
 IPR001737  Ribosomal RNA adenine methyltransferase KsgA/Erm
 IPR011530  Ribosomal RNA adenine dimethylase
 IPR020596  Ribosomal RNA adenine methylase transferase, conserved site
 IPR020598  Ribosomal RNA adenine methylase transferase, N-terminal
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000154 rRNA modification IEA
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0031167 rRNA methylation IEA
 biological_processGO:0032259 methylation IEA
 cellular_componentGO:0005759 mitochondrial matrix IBA
 molecular_functionGO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0008649 rRNA methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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