ENSDARG00000005510


Danio rerio

Features
Gene ID: ENSDARG00000005510
  
Biological name :gdf6b
  
Synonyms : A8E7N9 / gdf6b / growth differentiation factor 6b
  
Possible biological names infered from orthology : GDF6 / growth differentiation factor 6 / P43028 / Q6KF10
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 22999181
Gene end: 23002883
  
Corresponding Affymetrix probe sets: Dr.5770.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000126187
swissprot - A8E7N9
swissprot - B3DJ43
ZFIN ID - ZDB-GENE-980526-442
Ensembl - ENSDARG00000005510
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GDF6ENSGALG00000035901Gallus gallus
 GDF6ENSG00000156466Homo sapiens
 Gdf6ENSMUSG00000051279Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gdf6a / P85857 / growth differentiation factor 6a / GDF6* / P43028* / Q6KF10* / growth differentiation factor 6*ENSDARG0000005347958
gdf7 / growth differentiation factor 7 / P43029* / Q7Z4P5*ENSDARG0000004278443
gdf5 / growth differentiation factor 5 / P43026* / P43027*ENSDARG0000000276041
bmp4 / bone morphogenetic protein 4 / P12644* / P21275* / Bone morphotic protein 4 *ENSDARG0000001999526
bmp2a / bone morphogenetic protein 2a / BMP2* / P21274* / P12643* / Bone morphotic protein 2 * / bone morphogenetic protein 2*ENSDARG0000001340925
admp / anti-dorsalizing morphogenic proteinENSDARG0000002537225
bmp2b / bone morphogenetic protein 2b / BMP2* / P21274* / P12643* / Bone morphotic protein 2 * / bone morphogenetic protein 2*ENSDARG0000004143024
bmp6 / bone morphogenetic protein 6 / P20722* / P22004* / Bone morphotic protein 6 *ENSDARG0000001568623
bmp7b / bone morphogenetic protein 7bENSDARG0000006323023
bmp5 / bone morphogenetic protein 5 / P22003*ENSDARG0000010170123
bmp7a / bone morphogenetic protein 7a / BMP7* / P23359* / P18075* / Bone morphotic protein 7 * / bone morphogenetic protein 7*ENSDARG0000001826022
gdf2 / F1QWZ4 / growth differentiation factor 2 / Q9UK05* / Q9WV56*ENSDARG0000005917322
bmp10 / bone morphogenetic protein 10 / O95393* / Q9R229* / Bone morphotic protein 10 *ENSDARG0000006176922
bmp16 / bone morphogenetic protein 16ENSDARG0000010367922
bmp10l / bone morphogenetic protein 10, like / BMP10* / O95393* / bone morphogenetic protein 10*ENSDARG0000010923322
bmp8a / bone morphogenetic protein 8a / BMP8B* / Q7Z5Y6* / P34820* / P34821* / P55105* / Bone morphotic protein 8B * / Bone morphotic protein 8A * / bone morphogenetic protein 8b*ENSDARG0000003567721


Protein motifs (from Interpro)
Interpro ID Name
 IPR001111  TGF-beta, propeptide
 IPR001839  Transforming growth factor-beta, C-terminal
 IPR015615  Transforming growth factor-beta-related
 IPR017948  Transforming growth factor beta, conserved site
 IPR029034  Cystine-knot cytokine


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 biological_processGO:0010862 positive regulation of pathway-restricted SMAD protein phosphorylation IBA
 biological_processGO:0042981 regulation of apoptotic process IBA
 biological_processGO:0043408 regulation of MAPK cascade IBA
 biological_processGO:0048468 cell development IBA
 biological_processGO:0060395 SMAD protein signal transduction IBA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IBA
 molecular_functionGO:0005125 cytokine activity IBA
 molecular_functionGO:0005160 transforming growth factor beta receptor binding IBA
 molecular_functionGO:0008083 growth factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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