ENSDARG00000005559


Danio rerio

Features
Gene ID: ENSDARG00000005559
  
Biological name :pou4f1
  
Synonyms : pou4f1 / POU class 4 homeobox 1
  
Possible biological names infered from orthology : P17208 / POU domain, class 4, transcription factor 1 / Q01851
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 4539953
Gene end: 4543005
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000007850
NCBI entrez gene - 58057     See in Manteia.
RefSeq - NM_001312866
RefSeq Peptide - NP_001299795
swissprot - F1Q813
ZFIN ID - ZDB-GENE-000523-2
Ensembl - ENSDARG00000005559
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 POU4F1ENSGALG00000035441Gallus gallus
 POU4F1ENSG00000152192Homo sapiens
 P17208ENSMUSG00000048349Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pou4f2 / POU class 4 homeobox 2 / Q12837* / Q63934* / POU domain, class 4, transcription factor 2 *ENSDARG0000006973770
zgc:158291ENSDARG0000004437569
pou4f3 / Q90435 / POU class 4 homeobox 3 / Q15319*ENSDARG0000000620665
P56224 / pou3f3a / POU class 3 homeobox 3aENSDARG0000004203227
P79745 / pou3f3b / POU class 3 homeobox 3bENSDARG0000009589627
pou2f2a / POU class 2 homeobox 2a / Q00196* / P09086* / POU2F2* / POU class 2 homeobox 2* / POU domain, class 2, transcription factor 2 *ENSDARG0000001965826
P79746 / pou3f2b / POU class 3 homeobox 2b / POU3F2* / P20265* / P31360* / POU class 3 homeobox 2* / POU domain, class 3, transcription factor 2*ENSDARG0000007626226
pou2f2a / POU class 2 homeobox 2a / Q00196* / P09086* / POU2F2* / POU class 2 homeobox 2* / POU domain, class 2, transcription factor 2 *ENSDARG0000003681625
pou1f1 / POU class 1 homeobox 1 / P28069* / Q00286* / POU domain, class 1, transcription factor 1*ENSDARG0000005892425
Q90482 / pou3f1 / POU class 3 homeobox 1 / Q03052* / P21952* / POU domain, class 3, transcription factor 1 *ENSDARG0000000982324
pou2f3 / POU class 2 homeobox 3 / Q9UKI9*ENSDARG0000005238724
pou2f1b / POU class 2 homeobox 1b / P25425* / POU2F1* / P14859* / POU class 2 homeobox 1* / POU domain, class 2, transcription factor 1 *ENSDARG0000000799623
pou5f3 / POU domain, class 5, transcription factor 3 / POU5F2* / Q8N7G0* / P20263* / POU5F1* / Q01860* / Q06416* / POU5F1B* / POU class 5 homeobox 1* / POU class 5 homeobox 1B* / POU domain...ENSDARG0000004477423
pou3f2a / POU class 3 homeobox 2aENSDARG0000007022023


Protein motifs (from Interpro)
Interpro ID Name
 IPR000327  POU-specific domain
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR010982  Lambda repressor-like, DNA-binding domain superfamily
 IPR013847  POU domain
 IPR015584  POU domain, class 4, transcription factor 1
 IPR017970  Homeobox, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007507 heart development IGI
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
Regulation of TP53 Activity through Association with Co-factors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr