ENSDARG00000006240


Danio rerio

Features
Gene ID: ENSDARG00000006240
  
Biological name :slc27a1a
  
Synonyms : slc27a1a / solute carrier family 27 (fatty acid transporter), member 1a
  
Possible biological names infered from orthology : Q60714 / Q6PCB7 / SLC27A1 / solute carrier family 27 (fatty acid transporter), member 1 / solute carrier family 27 member 1
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 52545014
Gene end: 52603683
  
Corresponding Affymetrix probe sets: Dr.3725.1.A1_at (Zebrafish Array)   NM_001013537_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000006540
Ensembl peptide - ENSDARP00000152991
NCBI entrez gene - 541410     See in Manteia.
RefSeq - NM_001013537
RefSeq Peptide - NP_001013555
swissprot - F1QEZ5
ZFIN ID - ZDB-GENE-050320-112
Ensembl - ENSDARG00000006240
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q6PCB7ENSG00000130304Homo sapiens
 Q60714ENSMUSG00000031808Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc27a1b / solute carrier family 27 (fatty acid transporter), member 1b / Q6PCB7* / Q60714* / SLC27A1* / solute carrier family 27 member 1* / solute carrier family 27 (fatty acid transporte...ENSDARG0000010494969
slc27a4 / solute carrier family 27 (fatty acid transporter), member 4 / Q91VE0* / Q6P1M0* / solute carrier family 27 member 4* / Long-chain fatty acid transport protein 4 *ENSDARG0000001704759
slc27a2a / solute carrier family 27 (fatty acid transporter), member 2aENSDARG0000003623737
zgc:158482ENSDARG0000006752036
slc27a6 / solute carrier family 27 (fatty acid transporter), member 6 / Q9Y2P4* / solute carrier family 27 member 6*ENSDARG0000004605335
CU372926.1ENSDARG0000010073135
CT027815.1ENSDARG0000004605425


Protein motifs (from Interpro)
Interpro ID Name
 IPR000873  AMP-dependent synthetase/ligase
 IPR020845  AMP-binding, conserved site
 IPR030308  Fatty acid transport protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001676 long-chain fatty acid metabolic process IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0015908 fatty acid transport IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004467 long-chain fatty acid-CoA ligase activity IEA
 molecular_functionGO:0015245 fatty acid transmembrane transporter activity IEA
 molecular_functionGO:0031957 very long-chain fatty acid-CoA ligase activity IEA


Pathways (from Reactome)
Pathway description
Transport of fatty acids


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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