ENSDARG00000067520


Danio rerio

Features
Gene ID: ENSDARG00000067520
  
Biological name :zgc:158482
  
Synonyms : zgc:158482
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 54354
Gene end: 60885
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000087935
NCBI entrez gene - 100009650     See in Manteia.
RefSeq - NM_001083019
RefSeq Peptide - NP_001076488
swissprot - A2VCY4
ZFIN ID - ZDB-GENE-070209-32
Ensembl - ENSDARG00000067520
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc27a2a / solute carrier family 27 (fatty acid transporter), member 2aENSDARG0000003623753
CU372926.1ENSDARG0000010073152
slc27a6 / solute carrier family 27 (fatty acid transporter), member 6 / Q9Y2P4* / solute carrier family 27 member 6*ENSDARG0000004605349
slc27a1b / solute carrier family 27 (fatty acid transporter), member 1b / Q6PCB7* / Q60714* / SLC27A1* / solute carrier family 27 member 1* / solute carrier family 27 (fatty acid transporte...ENSDARG0000010494938
slc27a1a / solute carrier family 27 (fatty acid transporter), member 1a / Q6PCB7* / SLC27A1* / solute carrier family 27 member 1*ENSDARG0000000624037
slc27a4 / solute carrier family 27 (fatty acid transporter), member 4 / Q91VE0* / Q6P1M0* / solute carrier family 27 member 4* / Long-chain fatty acid transport protein 4 *ENSDARG0000001704736
CT027815.1ENSDARG0000004605431


Protein motifs (from Interpro)
Interpro ID Name
 IPR000873  AMP-dependent synthetase/ligase
 IPR020845  AMP-binding, conserved site
 IPR025110  AMP-binding enzyme, C-terminal domain
 IPR030302  Fatty acid transport protein 5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001676 long-chain fatty acid metabolic process IEA
 biological_processGO:0006699 bile acid biosynthetic process IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0015908 fatty acid transport IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004467 long-chain fatty acid-CoA ligase activity IEA
 molecular_functionGO:0015245 fatty acid transmembrane transporter activity IEA
 molecular_functionGO:0031957 very long-chain fatty acid-CoA ligase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009044 blood cell blood cell decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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