ENSDARG00000006869


Danio rerio
snaretransportstx17vesiclemembranevesicle-mediatedtargetcoiled-coilhomologydomainsyntaxin-intracellularproteinexocytosisergolgifusiondockingendoplasmicreticulum-golgiintermediatecompartmentorganizationautophagosomematurationcytoplasmplasmaendomembraneintegralcomponentcomplex

Features
Gene ID: ENSDARG00000006869
  
Biological name :stx17
  
Synonyms : stx17 / syntaxin 17
  
Possible biological names infered from orthology : P56962 / Q9D0I4
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 27383717
Gene end: 27405460
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000113713
Ensembl peptide - ENSDARP00000114720
NCBI entrez gene - 492808     See in Manteia.
RefSeq - NM_001007449
RefSeq Peptide - NP_001007450
swissprot - F1QFP8
swissprot - E9QID0
ZFIN ID - ZDB-GENE-041114-164
Ensembl - ENSDARG00000006869
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 STX17ENSGALG00000013462Gallus gallus
 STX17ENSG00000136874Homo sapiens
 Stx17ENSMUSG00000061455Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000727  Target SNARE coiled-coil homology domain
 IPR010989  SNARE
 IPR028676  Syntaxin-17


Gene Ontology (GO)
macromolecule localizationestablishment of localizationcellular localizationcellular component organizationmembrane dockingcatabolic processcellular metabolic processprocess utilizing autophagic mechanismmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmembrane dockingcatabolic processcellular metabolic processprocess utilizing autophagic mechanismmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmembrane dockingcatabolic processcellular metabolic processprocess utilizing autophagic mechanismmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmembrane dockingcatabolic processcellular metabolic processprocess utilizing autophagic mechanismmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmembrane dockingcatabolic processcellular metabolic processprocess utilizing autophagic mechanismmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmembrane dockingcatabolic processcellular metabolic processprocess utilizing autophagic mechanismmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmembrane dockingcatabolic processcellular metabolic processprocess utilizing autophagic mechanismmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmembrane dockingcatabolic processcellular metabolic processprocess utilizing autophagic mechanismmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmembrane dockingcatabolic processcellular metabolic processprocess utilizing autophagic mechanismmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmembrane dockingcatabolic processcellular metabolic processprocess utilizing autophagic mechanismmacromolecule locmacromolecule localizationestablishment of establishment of localizationcellular localizacellular localizationcellular componencellular component organizationmembrane dockingmembrane dockingcatabolic processcatabolic processcellular metabolicellular metabolic processprocess utilizingprocess utilizing autophagic mechanism
protein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein binding
cellmembraneprotein-containing complexcellmembraneprotein-containing complexcellmembraneprotein-containing complexcellmembraneprotein-containing complexcellmembraneprotein-containing complexcellmembraneprotein-containing complexcellmembraneprotein-containing complexcellmembraneprotein-containing complexcellmembraneprotein-containing complexcellmembraneprotein-containing complexcellcellmembranemembraneprotein-containing complexprotein-containing complex
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0006887 exocytosis IBA
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IEA
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0048278 vesicle docking IBA
 biological_processGO:0097111 endoplasmic reticulum-Golgi intermediate compartment organization IEA
 biological_processGO:0097352 autophagosome maturation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0012505 endomembrane system IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 cellular_componentGO:0031201 SNARE complex IBA
 molecular_functionGO:0000149 SNARE binding IEA
 molecular_functionGO:0005484 SNAP receptor activity IBA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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