ENSGALG00000013462


Gallus gallus

Features
Gene ID: ENSGALG00000013462
  
Biological name :STX17
  
Synonyms : STX17 / syntaxin-17
  
Possible biological names infered from orthology : P56962 / Q9D0I4
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 89613158
Gene end: 89644897
  
Corresponding Affymetrix probe sets: Gga.11166.1.S1_at (Chicken Array)   GgaAffx.12202.1.S1_at (Chicken Array)   GgaAffx.8575.1.A1_at (Chicken Array)   GgaAffx.8575.1.A1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000021905
NCBI entrez gene - 420995     See in Manteia.
RefSeq - NM_001031009
RefSeq - XM_015282380
RefSeq - XM_015282381
RefSeq Peptide - NP_001026180
swissprot - F1NG31
Ensembl - ENSGALG00000013462
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 stx17ENSDARG00000006869Danio rerio
 STX17ENSG00000136874Homo sapiens
 Stx17ENSMUSG00000061455Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000727  Target SNARE coiled-coil homology domain
 IPR010989  SNARE
 IPR028676  Syntaxin-17


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0006887 exocytosis IBA
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IEA
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0007030 Golgi organization IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0016240 autophagosome membrane docking IEA
 biological_processGO:0034497 protein localization to phagophore assembly site IEA
 biological_processGO:0048278 vesicle docking IBA
 biological_processGO:0097111 endoplasmic reticulum-Golgi intermediate compartment organization IEA
 biological_processGO:0097352 autophagosome maturation IEA
 cellular_componentGO:0000421 autophagosome membrane IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005776 autophagosome IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005793 endoplasmic reticulum-Golgi intermediate compartment IEA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0012505 endomembrane system IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 cellular_componentGO:0030897 HOPS complex IEA
 cellular_componentGO:0031201 SNARE complex IEA
 cellular_componentGO:0044233 ER-mitochondrion membrane contact site IEA
 molecular_functionGO:0000149 SNARE binding IBA
 molecular_functionGO:0005484 SNAP receptor activity IEA
 molecular_functionGO:0019903 protein phosphatase binding IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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