ENSDARG00000007080


Danio rerio

Features
Gene ID: ENSDARG00000007080
  
Biological name :rhcgl1
  
Synonyms : rhcgl1 / Rh family, C glycoprotein, like 1
  
Possible biological names infered from orthology : Ammonium transporter Rh type C / Q9QXP0 / Q9UBD6 / RHCG / Rh family C glycoprotein
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 36381709
Gene end: 36391687
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000020191
NCBI entrez gene - 563826     See in Manteia.
RefSeq - NM_001109843
RefSeq Peptide - NP_001103313
swissprot - F1QZM1
ZFIN ID - ZDB-GENE-060209-2
Ensembl - ENSDARG00000007080
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RHCGENSGALG00000006635Gallus gallus
 RHCGENSG00000140519Homo sapiens
 RhcgENSMUSG00000030549Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rhcga / Rh family, C glycoprotein a / RHCG* / Q9UBD6* / Q9QXP0* / Rh family C glycoprotein* / Ammonium transporter Rh type C *ENSDARG0000000320378
rhcgb / Rh family, C glycoprotein b / RHCG* / Q9UBD6* / Q9QXP0* / Rh family C glycoprotein* / Ammonium transporter Rh type C *ENSDARG0000010026572
rhbg / Q7T070 / Rh family, B glycoprotein (gene/pseudogene) / Q8BUX5* / Q9H310* / Gm38392* / Ammonium transporter Rh type B *ENSDARG0000000901857
rhag / Rh associated glycoprotein / Q02094* / Q9QUT0* / Ammonium transporter Rh type A *ENSDARG0000001925348
rh50 / Rh50-like proteinENSDARG0000004184842
rhd / Rh blood group, D antigen / RHCE* / P18577* / Q02161* / Rh blood group CcEe antigens*ENSDARG0000000219432


Protein motifs (from Interpro)
Interpro ID Name
 IPR002229  Blood group Rhesus C/E/D polypeptide
 IPR024041  Ammonium transporter AmtB-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006814 sodium ion transport IMP
 biological_processGO:0015695 organic cation transport IBA
 biological_processGO:0015696 ammonium transport IMP
 biological_processGO:0072488 ammonium transmembrane transport IBA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008519 ammonium transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
Rhesus glycoproteins mediate ammonium transport.


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000037 anatomical structure anatomical structure increased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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