ENSDARG00000007097


Danio rerio

Features
Gene ID: ENSDARG00000007097
  
Biological name :her13
  
Synonyms : hairy-related 13 / her13
  
Possible biological names infered from orthology : HES6 / hes family bHLH transcription factor 6 / Q96HZ4 / Q9JHE6 / Transcription cofactor HES-6
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 7187228
Gene end: 7190183
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000101873
NCBI entrez gene - 550600     See in Manteia.
RefSeq - NM_001017901
RefSeq Peptide - NP_001017901
swissprot - F1QU78
ZFIN ID - ZDB-GENE-050228-1
Ensembl - ENSDARG00000007097
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HES6ENSG00000144485Homo sapiens
 Hes6ENSMUSG00000067071Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hes6 / hes family bHLH transcription factor 6ENSDARG0000001933550
her8.2 / hairy-related 8.2ENSDARG0000006967528
her8a / hairy-related 8aENSDARG0000001636326
her6 / hairy-related 6 / HES1* / Q14469* / P35428* / Transcription factor HES-1 * / hes family bHLH transcription factor 1*ENSDARG0000000651425
her9 / hairy-related 9 / HES4* / Q9HCC6* / hes family bHLH transcription factor 4*ENSDARG0000005643825
hes2.2 / hes family bHLH transcription factor 2, tandem duplicate 2 / HES2* / O54792* / Q9Y543* / Transcription factor HES-2 * / hes family bHLH transcription factor 2*ENSDARG0000006816818
hes2.1 / hes family bHLH transcription factor 2, tandem duplicate 1 / HES2* / O54792* / Q9Y543* / Transcription factor HES-2 * / hes family bHLH transcription factor 2*ENSDARG0000007489714


Protein motifs (from Interpro)
Interpro ID Name
 IPR003650  Orange domain
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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