ENSDARG00000016363


Danio rerio

Features
Gene ID: ENSDARG00000016363
  
Biological name :her8a
  
Synonyms : hairy-related 8a / her8a
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 26429941
Gene end: 26436480
  
Corresponding Affymetrix probe sets: Dr.25187.1.S1_a_at (Zebrafish Array)   Dr.25187.2.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000010206
Ensembl peptide - ENSDARP00000111735
NCBI entrez gene - 323656     See in Manteia.
swissprot - F1QI81
ZFIN ID - ZDB-GENE-030131-2376
Ensembl - ENSDARG00000016363
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
her8.2 / hairy-related 8.2ENSDARG0000006967541
her6 / hairy-related 6 / HES1* / Q14469* / P35428* / Transcription factor HES-1 * / hes family bHLH transcription factor 1*ENSDARG0000000651431
her9 / hairy-related 9 / HES4* / Q9HCC6* / hes family bHLH transcription factor 4*ENSDARG0000005643830
hes6 / hes family bHLH transcription factor 6ENSDARG0000001933529
her13 / hairy-related 13 / HES6* / Q9JHE6* / Q96HZ4* / Transcription cofactor HES-6 * / hes family bHLH transcription factor 6*ENSDARG0000000709727
hes2.2 / hes family bHLH transcription factor 2, tandem duplicate 2 / HES2* / O54792* / Q9Y543* / Transcription factor HES-2 * / hes family bHLH transcription factor 2*ENSDARG0000006816822
hes2.1 / hes family bHLH transcription factor 2, tandem duplicate 1 / HES2* / O54792* / Q9Y543* / Transcription factor HES-2 * / hes family bHLH transcription factor 2*ENSDARG0000007489717


Protein motifs (from Interpro)
Interpro ID Name
 IPR003650  Orange domain
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0042063 gliogenesis IMP
 biological_processGO:0050768 negative regulation of neurogenesis IMP
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain malformed , abnormal
Show

 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000107 eye eye edematous , abnormal
Show

 ZFA:0000822 rhombomere 2 rhombomere 2 neuron mislocalised , abnormal
Show

 ZFA:0001032 rhombomere 4 rhombomere 4 neuron mislocalised , abnormal
Show

 ZFA:0001115 trunk trunk bent , abnormal
Show

 ZFA:0001656 pleuroperitoneal cavity pleuroperitoneal cavity edematous , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr