ENSDARG00000007824


Danio rerio

Features
Gene ID: ENSDARG00000007824
  
Biological name :camta1b
  
Synonyms : calmodulin binding transcription activator 1b / camta1b
  
Possible biological names infered from orthology : A2A891 / calmodulin binding transcription activator 1 / CAMTA1 / Q9Y6Y1
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 39672874
Gene end: 39926872
  
Corresponding Affymetrix probe sets: Dr.24139.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000046662
Ensembl peptide - ENSDARP00000129879
swissprot - A0A0H2UKG9
swissprot - E7F2K8
ZFIN ID - ZDB-GENE-080229-1
Ensembl - ENSDARG00000007824
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CAMTA1ENSGALG00000039525Gallus gallus
 CAMTA1ENSG00000171735Homo sapiens
 A2A891ENSMUSG00000014592Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
camta1a / calmodulin binding transcription activator 1a / CAMTA1* / A2A891* / Q9Y6Y1* / calmodulin binding transcription activator 1*ENSDARG0000007742864
camta2 / calmodulin binding transcription activator 2ENSDARG000000927992
camta1 / calmodulin binding transcription activator 1ENSDARG000001054350


Protein motifs (from Interpro)
Interpro ID Name
 IPR000048  IQ motif, EF-hand binding site
 IPR002110  Ankyrin repeat
 IPR002909  IPT domain
 IPR005559  CG-1 DNA-binding domain
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR020683  Ankyrin repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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