ENSGALG00000039525


Gallus gallus

Features
Gene ID: ENSGALG00000039525
  
Biological name :CAMTA1
  
Synonyms : calmodulin binding transcription activator 1 / CAMTA1
  
Possible biological names infered from orthology : A2A891 / Q9Y6Y1
  
Species: Gallus gallus
  
Chr. number: 21
Strand: -1
Band:
Gene start: 309659
Gene end: 433746
  
Corresponding Affymetrix probe sets: Gga.8292.1.S1_at (Chicken Array)   GgaAffx.393.1.S1_at (Chicken Array)   GgaAffx.393.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000050108
NCBI entrez gene - 419369     See in Manteia.
RefSeq - XM_015296949
RefSeq - XM_015296950
RefSeq - XM_015296951
RefSeq - XM_015296953
RefSeq - XM_015296954
RefSeq - XM_015296955
RefSeq - XM_015296956
RefSeq - XM_015296957
RefSeq - XM_417530
RefSeq - XM_004947330
swissprot - A0A1D5PBI0
Ensembl - ENSGALG00000039525
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 camta1aENSDARG00000077428Danio rerio
 camta1bENSDARG00000007824Danio rerio
 CAMTA1ENSG00000171735Homo sapiens
 A2A891ENSMUSG00000014592Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CAMTA2* / O94983* / Q80Y50* / calmodulin binding transcription activator 2*ENSGALG000000335691


Protein motifs (from Interpro)
Interpro ID Name
 IPR000048  IQ motif, EF-hand binding site
 IPR002110  Ankyrin repeat
 IPR002909  IPT domain
 IPR005559  CG-1 DNA-binding domain
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR020683  Ankyrin repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0050885 neuromuscular process controlling balance IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr