ENSDARG00000008573
Danio rerio | |
Features
| Gene ID: | ENSDARG00000008573 | | | | | Biological name : | fam20b | | | | | Synonyms : | fam20b / family with sequence similarity 20, member B (H. sapiens) / Q5RH51 | | | | | Possible biological names infered from orthology : | FAM20B, glycosaminoglycan xylosylkinase / Glycosaminoglycan xylosylkinase / O75063 / Q8VCS3 | | | | | Species: | Danio rerio | | | | | Chr. number: | 20 | | Strand: | -1 | | Band: | | | Gene start: | 15857041 | | Gene end: | 15922986 | | | | | Corresponding Affymetrix probe sets: | Dr.11153.1.A1_at (Zebrafish Array) NM_001044818_at (Zebrafish Genome Array with custom cdf files) | | | | | Cross references: | Ensembl peptide - ENSDARP00000146564
Ensembl peptide - ENSDARP00000018976
Ensembl peptide - ENSDARP00000126637
Ensembl peptide - ENSDARP00000126738
Ensembl peptide - ENSDARP00000126917
Ensembl peptide - ENSDARP00000126968
NCBI entrez gene - 557060
See in Manteia.
RefSeq - NM_001044818
RefSeq - XM_009294613
RefSeq Peptide - NP_001038283
swissprot - R4GDT1
swissprot - R4GE25
swissprot - R4GEK4
swissprot - R4GEQ5
swissprot - Q5RH51
ZFIN ID - ZDB-GENE-040724-125
Ensembl - ENSDARG00000008573
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See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed
Ortholog prediction (from Ensembl)
Paralog prediction (from Ensembl)
| fam20cl / family with sequence similarity 20, member C like | ENSDARG00000060325 | 38 | | fam20cb / family with sequence similarity 20, member Cb / Q8IXL6* / FAM20C* / Q5MJS3* / FAM20C, golgi associated secretory pathway kinase* / Extracellular serine/threonine protein kinase FAM20C * | ENSDARG00000090338 | 38 | | fam20a / family with sequence similarity 20, member A / Q8CID3* / Q96MK3* / Pseudokinase FAM20A * / FAM20A, golgi associated secretory pathway pseudokinase* | ENSDARG00000079486 | 37 | | fam20ca / family with sequence similarity 20, member Ca / FAM20C* / Q8IXL6* / FAM20C, golgi associated secretory pathway kinase* | ENSDARG00000074317 | 36 |
Protein motifs (from Interpro)
Gene Ontology (GO)
Pathways (from Reactome)
No match
Phenotype (from MGI, Zfin or HPO)
| ZFA:0000107 | eye | eye protruding , abnormal |
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| | ZFA:0000737 | cranium | cranium decreased size , abnormal
cranium extracellular matrix decreased volume , abnormal
cranium perichondral bone hyperplastic , abnormal |
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| | ZFA:0001216 | splanchnocranium | splanchnocranium structure , abnormal |
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| | ZFA:0001272 | palatoquadrate arch | palatoquadrate arch decreased length , abnormal |
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| | ZFA:0001273 | ventral mandibular arch | ventral mandibular arch decreased length , abnormal |
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| | ZFA:0001400 | ceratohyal cartilage | ceratohyal cartilage chondrocyte morphology , abnormal
ceratohyal cartilage morphology , abnormal
ceratohyal cartilage decreased size , abnormal
ceratohyal cartilage hypoplastic , abnormal
ceratohyal cartilage aplastic , abnormal |
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| | ZFA:0001424 | chondrocranium | chondrocranium structure , abnormal |
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| | ZFA:0001458 | cranial cartilage | cranial cartilage hypoplastic , abnormal |
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| | ZFA:0001580 | neurocranium | neurocranium anterior region hypoplastic , abnormal |
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| | ZFA:0001630 | perichondral bone | perichondral bone has extra parts of type osteoblast , abnormal
perichondral bone hyperplastic , abnormal
perichondral bone aplastic , abnormal |
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Interacting proteins (from Reactome)
No match
0 s.
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