ENSDARG00000060325


Danio rerio

Features
Gene ID: ENSDARG00000060325
  
Biological name :fam20cl
  
Synonyms : fam20cl / family with sequence similarity 20, member C like
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 24954103
Gene end: 24967475
  
Corresponding Affymetrix probe sets: Dr.22229.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000079306
Ensembl peptide - ENSDARP00000128153
NCBI entrez gene - 100007251     See in Manteia.
swissprot - Q1MTC0
swissprot - X1WD56
ZFIN ID - ZDB-GENE-070705-319
Ensembl - ENSDARG00000060325
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000034504Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fam20cb / family with sequence similarity 20, member Cb / Q8IXL6* / FAM20C* / Q5MJS3* / FAM20C, golgi associated secretory pathway kinase* / Extracellular serine/threonine protein kinase FAM20C *ENSDARG0000009033848
fam20ca / family with sequence similarity 20, member Ca / FAM20C* / Q8IXL6* / FAM20C, golgi associated secretory pathway kinase*ENSDARG0000007431746
fam20a / family with sequence similarity 20, member A / Q8CID3* / Q96MK3* / Pseudokinase FAM20A * / FAM20A, golgi associated secretory pathway pseudokinase*ENSDARG0000007948642
Q5RH51 / fam20b / family with sequence similarity 20, member B (H. sapiens) / Q8VCS3* / O75063* / Glycosaminoglycan xylosylkinase * / FAM20B, glycosaminoglycan xylosylkinase*ENSDARG0000000857331


Protein motifs (from Interpro)
Interpro ID Name
 IPR009581  FAM20, C-terminal
 IPR024869  FAM20


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0071391 cellular response to estrogen stimulus IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr