ENSDARG00000009724


Danio rerio

Features
Gene ID: ENSDARG00000009724
  
Biological name :rpn2
  
Synonyms : ribophorin II / rpn2
  
Possible biological names infered from orthology : Mus musculus ribophorin II (Rpn2), transcript variant 4, mRNA. / P04844 / Q9DBG6
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 15225534
Gene end: 15297210
  
Corresponding Affymetrix probe sets: Dr.4217.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000138999
Ensembl peptide - ENSDARP00000140093
Ensembl peptide - ENSDARP00000146160
Ensembl peptide - ENSDARP00000146466
Ensembl peptide - ENSDARP00000012197
Ensembl peptide - ENSDARP00000106080
Ensembl peptide - ENSDARP00000131637
Ensembl peptide - ENSDARP00000132300
swissprot - A0A0J9YJ63
swissprot - A0A0J9YJJ6
swissprot - A0A0R4IAW5
swissprot - A0A0R4IV98
swissprot - F1QC34
swissprot - F1QFW5
ZFIN ID - ZDB-GENE-030131-7928
Ensembl - ENSDARG00000009724
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RPN2ENSGALG00000003815Gallus gallus
 RPN2ENSG00000118705Homo sapiens
 Rpn2ENSMUSG00000027642Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008814  Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit Swp1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006487 protein N-linked glycosylation IEA
 cellular_componentGO:0008250 oligosaccharyltransferase complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000095 pharyngeal arch 3-7 skeleton pharyngeal arch 3-7 skeleton quality , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0001114 head head decreased size , abnormal
head edematous , abnormal
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 ZFA:0001227 mandibular arch skeleton mandibular arch skeleton decreased length , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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