ENSGALG00000003815


Gallus gallus
membraneRPN2glycosyltransferasesubunitswpproteinn-linkedglycosylationoligosaccharyltransferasecomplexintegralcomponent

Features
Gene ID: ENSGALG00000003815
  
Biological name :RPN2
  
Synonyms : dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 precursor / RPN2
  
Possible biological names infered from orthology : Mus musculus ribophorin II (Rpn2), transcript variant 4, mRNA. / P04844 / Q9DBG6 / ribophorin II
  
Species: Gallus gallus
  
Chr. number: 20
Strand: 1
Band:
Gene start: 5165779
Gene end: 5186674
  
Corresponding Affymetrix probe sets: Gga.4485.2.S1_s_at (Chicken Array)   Gga.4485.3.S1_at (Chicken Array)   GgaAffx.11607.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000006038
Ensembl peptide - ENSGALP00000060444
Ensembl peptide - ENSGALP00000059459
Ensembl peptide - ENSGALP00000006039
NCBI entrez gene - 419177     See in Manteia.
RefSeq - NM_001006288
RefSeq - XM_015296358
RefSeq Peptide - NP_001006288
swissprot - E1C8Z0
swissprot - A0A1D6UPU6
swissprot - A0A1L1RNV0
swissprot - A0A1L1RL15
Ensembl - ENSGALG00000003815
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpn2ENSDARG00000009724Danio rerio
 RPN2ENSG00000118705Homo sapiens
 Rpn2ENSMUSG00000027642Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008814  Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit Swp1


Gene Ontology (GO)
nitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processglycosylationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processglycosylationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processglycosylationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processglycosylationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processglycosylationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processglycosylationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processglycosylationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processglycosylationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processglycosylationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processglycosylationnitrogen compound metabnitrogen compound metabolic processbiosynthetic processbiosynthetic processcellular metabolic proccellular metabolic processprimary metabolic proceprimary metabolic processorganic substance metaborganic substance metabolic processglycosylationglycosylation
cellmembraneprotein-containing complexorganellecellmembraneprotein-containing complexorganellecellmembraneprotein-containing complexorganellecellmembraneprotein-containing complexorganellecellmembraneprotein-containing complexorganellecellmembraneprotein-containing complexorganellecellmembraneprotein-containing complexorganellecellmembraneprotein-containing complexorganellecellmembraneprotein-containing complexorganellecellmembraneprotein-containing complexorganellecellcellmembranemembraneprotein-containing complexprotein-containing complexorganelleorganelle
TypeGO IDTermEv.Code
 biological_processGO:0006487 protein N-linked glycosylation IEA
 cellular_componentGO:0008250 oligosaccharyltransferase complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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