ENSDARG00000010047


Danio rerio

Features
Gene ID: ENSDARG00000010047
  
Biological name :neu3.2
  
Synonyms : neu3.2 / sialidase 3 (membrane sialidase), tandem duplicate 2
  
Possible biological names infered from orthology : NEU3 / neuraminidase 3 / Q9JMH7 / Q9UQ49
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 21796663
Gene end: 21799292
  
Corresponding Affymetrix probe sets: Dr.16670.1.S1_at (Zebrafish Array)   NM_001003644_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000017916
NCBI entrez gene - 445250     See in Manteia.
RefSeq - NM_001003644
RefSeq Peptide - NP_001003644
swissprot - Q6DEM9
ZFIN ID - ZDB-GENE-040801-262
Ensembl - ENSDARG00000010047
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NEU3ENSGALG00000028960Gallus gallus
 NEU3ENSG00000162139Homo sapiens
 Neu3ENSMUSG00000035239Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
neu3.5 / sialidase 3 (membrane sialidase), tandem duplicate 5 / NEU3* / Q9JMH7* / Q9UQ49* / neuraminidase 3*ENSDARG0000009636873
neu3.4 / sialidase 3 (membrane sialidase), tandem duplicate 4 / NEU3* / Q9JMH7* / Q9UQ49* / neuraminidase 3*ENSDARG0000009638163
neu3.3 / sialidase 3 (membrane sialidase), tandem duplicate 3 / NEU3* / Q9JMH7* / Q9UQ49* / neuraminidase 3*ENSDARG0000005832760
neu3.1 / sialidase 3 (membrane sialidase), tandem duplicate 1 / NEU3* / Q9JMH7* / Q9UQ49* / neuraminidase 3*ENSDARG0000009638255
neu4 / sialidase 4 / Q8BZL1* / Q8WWR8* / neuraminidase 4*ENSDARG0000005767745


Protein motifs (from Interpro)
Interpro ID Name
 IPR011040  Sialidase
 IPR026856  Sialidase family
 IPR026944  Sialidase-3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006689 ganglioside catabolic process IBA
 biological_processGO:0009313 oligosaccharide catabolic process IBA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0016020 membrane IBA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IBA
 molecular_functionGO:0004308 exo-alpha-sialidase activity IDA


Pathways (from Reactome)
Pathway description
Glycosphingolipid metabolism
Sialic acid metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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