ENSDARG00000012399


Danio rerio

Features
Gene ID: ENSDARG00000012399
  
Biological name :adssl
  
Synonyms : adenylosuccinate synthase, like / adssl
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 26522571
Gene end: 26531535
  
Corresponding Affymetrix probe sets: Dr.18323.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000118803
swissprot - F1Q9U6
ZFIN ID - ZDB-GENE-020419-28
Ensembl - ENSDARG00000012399
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
adss / Q568F6 / adenylosuccinate synthase / P30520* / P46664* / adenylosuccinate synthetase, non muscle*ENSDARG0000000207170
adssl1 / Q6NSN5 / adenylosuccinate synthase like 1 / Q8N142*ENSDARG0000009951764


Protein motifs (from Interpro)
Interpro ID Name
 IPR001114  Adenylosuccinate synthetase
 IPR018220  Adenylosuccinate synthase, GTP-binding site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR033128  Adenylosuccinate synthase, active site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006164 purine nucleotide biosynthetic process IEA
 biological_processGO:0006167 AMP biosynthetic process IEA
 biological_processGO:0044208 "de novo" AMP biosynthetic process IBA
 biological_processGO:0046040 IMP metabolic process IBA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0000287 magnesium ion binding IEA
 molecular_functionGO:0004019 adenylosuccinate synthase activity IBA
 molecular_functionGO:0005525 GTP binding IEA
 molecular_functionGO:0016874 ligase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain necrotic , abnormal
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 ZFA:0000012 central nervous system central nervous system necrotic , abnormal
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 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000112 gut gut hypoplastic , abnormal
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 ZFA:0000123 liver liver hypoplastic , abnormal
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 ZFA:0001114 head head decreased size , abnormal
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 ZFA:0001115 trunk trunk necrotic , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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