ENSDARG00000012539


Danio rerio

Features
Gene ID: ENSDARG00000012539
  
Biological name :dnase1
  
Synonyms : deoxyribonuclease I / dnase1
  
Possible biological names infered from orthology : deoxyribonuclease 1 / deoxyribonuclease 1 like 2 / DNASE1L2 / Mus musculus deoxyribonuclease I (Dnase1), transcript variant 2, mRNA. / P24855 / P49183 / Q92874 / Q9D1G0
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 27778975
Gene end: 27784457
  
Corresponding Affymetrix probe sets: Dr.19519.1.S1_at (Zebrafish Array)   NM_001002674_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000020280
NCBI entrez gene - 436947     See in Manteia.
RefSeq - NM_001002674
RefSeq Peptide - NP_001002674
swissprot - Q6DG72
ZFIN ID - ZDB-GENE-040718-423
Ensembl - ENSDARG00000012539
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000046313Gallus gallus
 DNASE1ENSGALG00000041066Gallus gallus
 DNASE1ENSG00000213918Homo sapiens
 Q92874ENSG00000167968Homo sapiens
 Dnase1ENSMUSG00000005980Mus musculus
 Q9D1G0ENSMUSG00000024136Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dnase1l1 / deoxyribonuclease I-like 1 / P49184* / Q9D7J6* / deoxyribonuclease 1 like 1*ENSDARG0000000546444
dnase1l4.1 / deoxyribonuclease 1 like 4, tandem duplicate 1ENSDARG0000001512341
dnase1l1l / deoxyribonuclease I-like 1-likeENSDARG0000002386141
dnase1l4.2 / deoxyribonuclease 1 like 4, tandem duplicate 2ENSDARG0000001137637


Protein motifs (from Interpro)
Interpro ID Name
 IPR005135  Endonuclease/exonuclease/phosphatase
 IPR016202  Deoxyribonuclease I
 IPR018057  Deoxyribonuclease I, active site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006308 DNA catabolic process IEA
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0004518 nuclease activity IEA
 molecular_functionGO:0004519 endonuclease activity IEA
 molecular_functionGO:0004536 deoxyribonuclease activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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