ENSDARG00000013000


Danio rerio

Features
Gene ID: ENSDARG00000013000
  
Biological name :ppfia2
  
Synonyms : ppfia2 / protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
  
Possible biological names infered from orthology : O75334 / PTPRF interacting protein alpha 2
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 21962316
Gene end: 22207873
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000119723
NCBI entrez gene - 566597     See in Manteia.
RefSeq - NM_001045111
RefSeq Peptide - NP_001038576
swissprot - Q5TZ25
ZFIN ID - ZDB-GENE-030131-7905
Ensembl - ENSDARG00000013000
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PPFIA2ENSGALG00000010958Gallus gallus
 O75334ENSG00000139220Homo sapiens
 Ppfia2ENSMUSG00000053825Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ppfia4 / protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 / O75335* / PTPRF interacting protein alpha 4*ENSDARG0000005320569
ppfia3 / protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 / O75145* / P60469* / PTPRF interacting protein alpha 3*ENSDARG0000007705361
ppfia1 / protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 / Q13136* / PTPRF interacting protein alpha 1*ENSDARG0000009867428
kazna / A9C3W3 / kazrin, periplakin interacting protein a / KAZN* / Q69ZS8* / Q674X7* / Kazrin * / kazrin, periplakin interacting protein*ENSDARG0000007692316
ppfibp1b / PTPRF interacting protein, binding protein 1b (liprin beta 1) / Q86W92* / PPFIBP1* / PPFIA binding protein 1*ENSDARG0000010005716
ppfibp1a / PTPRF interacting protein, binding protein 1a (liprin beta 1) / Q86W92* / Q8C8U0* / PPFIBP1* / PPFIA binding protein 1* / PTPRF interacting protein, binding protein 1 (liprin beta 1)*ENSDARG0000004574915
ppfibp2a / PTPRF interacting protein, binding protein 2a (liprin beta 2) / O35711* / Q8ND30* / PPFIBP2* / PPFIA binding protein 2* / PTPRF interacting protein, binding protein 2 (liprin beta 2)*ENSDARG0000006197715
kaznb / kazrin, periplakin interacting protein b / KAZN* / Q69ZS8* / Q674X7* / Kazrin * / kazrin, periplakin interacting protein*ENSDARG000000066017
ppfibp2b / PTPRF interacting protein, binding protein 2b (liprin beta 2) / O35711* / Q8ND30* / PPFIBP2* / PPFIA binding protein 2* / PTPRF interacting protein, binding protein 2 (liprin beta 2)*ENSDARG000000291684


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR029515  LAR-interacting protein, Liprin
 IPR030441  Liprin-alpha-2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0045202 synapse IEA


Pathways (from Reactome)
Pathway description
Glutamate Neurotransmitter Release Cycle
Acetylcholine Neurotransmitter Release Cycle
Receptor-type tyrosine-protein phosphatases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000005754 ptprfb / A4IFW2 / protein tyrosine phosphatase, receptor type, f, b / PTPRF* / P10586* / A2A8L5* / Receptor-type tyrosine-protein phosphatase F * / protein tyrosine phosphatase, receptor type F*  / complex / reaction






 

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