ENSDARG00000013561


Danio rerio

Features
Gene ID: ENSDARG00000013561
  
Biological name :pgm1
  
Synonyms : pgm1 / phosphoglucomutase 1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 32010183
Gene end: 32025225
  
Corresponding Affymetrix probe sets: Dr.10215.1.A1_at (Zebrafish Array)   Dr.10215.2.S1_at (Zebrafish Array)   NM_201025_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000006510
NCBI entrez gene - 394000     See in Manteia.
RefSeq - NM_201025
RefSeq Peptide - NP_957319
swissprot - F1QF00
ZFIN ID - ZDB-GENE-040426-1245
Ensembl - ENSDARG00000013561
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pgm5 / phosphoglucomutase 5 / Q15124* / Q8BZF8* / Phosphoglucomutase-like protein 5 *ENSDARG0000006074563


Protein motifs (from Interpro)
Interpro ID Name
 IPR005841  Alpha-D-phosphohexomutase superfamily
 IPR005843  Alpha-D-phosphohexomutase, C-terminal
 IPR005844  Alpha-D-phosphohexomutase, alpha/beta/alpha domain I
 IPR005845  Alpha-D-phosphohexomutase, alpha/beta/alpha domain II
 IPR005846  Alpha-D-phosphohexomutase, alpha/beta/alpha domain III
 IPR016055  Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III
 IPR016066  Alpha-D-phosphohexomutase, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0005978 glycogen biosynthetic process IBA
 biological_processGO:0006006 glucose metabolic process IBA
 biological_processGO:0019388 galactose catabolic process IBA
 biological_processGO:0071704 organic substance metabolic process IEA
 cellular_componentGO:0005829 cytosol IBA
 molecular_functionGO:0000287 magnesium ion binding IEA
 molecular_functionGO:0004614 phosphoglucomutase activity IBA
 molecular_functionGO:0016868 intramolecular transferase activity, phosphotransferases IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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