ENSDARG00000060745


Danio rerio

Features
Gene ID: ENSDARG00000060745
  
Biological name :pgm5
  
Synonyms : pgm5 / phosphoglucomutase 5
  
Possible biological names infered from orthology : Phosphoglucomutase-like protein 5 / Q15124 / Q8BZF8
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 30456161
Gene end: 30494617
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000080329
NCBI entrez gene - 560297     See in Manteia.
RefSeq - NM_001126396
RefSeq Peptide - NP_001119868
swissprot - B0R0B3
ZFIN ID - ZDB-GENE-060503-838
Ensembl - ENSDARG00000060745
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PGM5ENSGALG00000014995Gallus gallus
 PGM5ENSG00000154330Homo sapiens
 Pgm5ENSMUSG00000041731Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pgm1 / phosphoglucomutase 1ENSDARG0000001356162


Protein motifs (from Interpro)
Interpro ID Name
 IPR005841  Alpha-D-phosphohexomutase superfamily
 IPR005843  Alpha-D-phosphohexomutase, C-terminal
 IPR005844  Alpha-D-phosphohexomutase, alpha/beta/alpha domain I
 IPR005845  Alpha-D-phosphohexomutase, alpha/beta/alpha domain II
 IPR005846  Alpha-D-phosphohexomutase, alpha/beta/alpha domain III
 IPR016055  Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0014706 striated muscle tissue development IMP
 biological_processGO:0030239 myofibril assembly IMP
 biological_processGO:0071704 organic substance metabolic process IEA
 cellular_componentGO:0001725 stress fiber IBA
 cellular_componentGO:0005914 spot adherens junction IBA
 cellular_componentGO:0005925 focal adhesion IBA
 cellular_componentGO:0009898 cytoplasmic side of plasma membrane IBA
 cellular_componentGO:0014704 intercalated disc IBA
 cellular_componentGO:0016010 dystrophin-associated glycoprotein complex IBA
 cellular_componentGO:0030018 Z disc IBA
 cellular_componentGO:0042383 sarcolemma IBA
 cellular_componentGO:0043034 costamere IBA
 molecular_functionGO:0016868 intramolecular transferase activity, phosphotransferases IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0005277 skeletal muscle skeletal muscle paralysed , abnormal
skeletal muscle morphology , abnormal
skeletal muscle disorganized , abnormal
Show

 ZFA:0005784 striated muscle cell striated muscle cell misaligned with striated muscle cell , abnormal
striated muscle cell myofibril disorganized , abnormal
striated muscle cell Z disc misaligned with striated muscle cell Z disc, abnormal
striated muscle cell myofilament disorganized , abnormal
striated muscle cell myofilament detached from myoseptum , abnormal
Show

 ZFA:0009115 skeletal muscle cell skeletal muscle cell detached from somite border , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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