ENSDARG00000013741


Danio rerio

Features
Gene ID: ENSDARG00000013741
  
Biological name :lancl1
  
Synonyms : LanC antibiotic synthetase component C-like 1 (bacterial) / lancl1 / Q90ZL2
  
Possible biological names infered from orthology : LanC like 1 / LanC-like protein 1 / O43813 / O89112
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 7517449
Gene end: 7539716
  
Corresponding Affymetrix probe sets: Dr.1004.1.S1_at (Zebrafish Array)   NM_001009891_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000018694
NCBI entrez gene - 494154     See in Manteia.
RefSeq - NM_001009891
RefSeq Peptide - NP_001009891
swissprot - B7ZVA0
swissprot - Q90ZL2
ZFIN ID - ZDB-GENE-040924-1
Ensembl - ENSDARG00000013741
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LANCL1ENSGALG00000002921Gallus gallus
 LANCL1ENSG00000115365Homo sapiens
 Lancl1ENSMUSG00000026000Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lancl2 / LanC lantibiotic synthetase component C-like 2 (bacterial) / Q9NS86* / LanC like 2*ENSDARG0000004546555


Protein motifs (from Interpro)
Interpro ID Name
 IPR007822  Lanthionine synthetase C-like
 IPR020464  LanC-like protein, eukaryotic


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0008270 zinc ion binding ISS
 molecular_functionGO:0043295 glutathione binding ISS
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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