ENSDARG00000013777


Danio rerio

Features
Gene ID: ENSDARG00000013777
  
Biological name :ppp1r13l
  
Synonyms : ppp1r13l / protein phosphatase 1, regulatory subunit 13 like
  
Possible biological names infered from orthology : protein phosphatase 1, regulatory (inhibitor) subunit 13 like / Q5I1X5 / Q8WUF5
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 35842933
Gene end: 35899617
  
Corresponding Affymetrix probe sets: Dr.19303.1.A1_at (Zebrafish Array)   NM_001014320_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000106399
Ensembl peptide - ENSDARP00000126054
Ensembl peptide - ENSDARP00000151632
NCBI entrez gene - 541507     See in Manteia.
RefSeq - NM_001014320
RefSeq - XM_005173643
RefSeq - XM_005173644
RefSeq Peptide - NP_001014342
swissprot - Q1L9A3
swissprot - I3IT03
ZFIN ID - ZDB-GENE-050327-33
Ensembl - ENSDARG00000013777
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q8WUF5ENSG00000104881Homo sapiens
 Q5I1X5ENSMUSG00000040734Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ppp1r13bb / protein phosphatase 1, regulatory subunit 13Bb / Q96KQ4* / Q62415* / PPP1R13B* / protein phosphatase 1 regulatory subunit 13B* / protein phosphatase 1, regulatory (inhibitor) subunit 13B*ENSDARG0000000914224
tp53bp2b / tumor protein p53 binding protein, 2b / Q13625* / TP53BP2* / Trp53bp2* / tumor protein p53 binding protein 2* / transformation related protein 53 binding protein 2*ENSDARG0000005485824
ppp1r13ba / protein phosphatase 1, regulatory subunit 13Ba / Q96KQ4* / Q62415* / PPP1R13B* / protein phosphatase 1 regulatory subunit 13B* / protein phosphatase 1, regulatory (inhibitor) subunit 13B*ENSDARG0000000437723
tp53bp2a / tumor protein p53 binding protein, 2a / Q13625* / TP53BP2* / Trp53bp2* / tumor protein p53 binding protein 2* / transformation related protein 53 binding protein 2*ENSDARG0000000913623
ppp1r12a / protein phosphatase 1, regulatory subunit 12A / O14974* / Q9DBR7* / protein phosphatase 1, regulatory (inhibitor) subunit 12A*ENSDARG000000107848
ppp1r12c / protein phosphatase 1, regulatory subunit 12C / Q9BZL4*ENSDARG000000524236
ppp1r16b / protein phosphatase 1, regulatory subunit 16B / Q8VHQ3* / Q96T49* / protein phosphatase 1, regulatory (inhibitor) subunit 16B*ENSDARG000000798604
ppp1r16a / protein phosphatase 1, regulatory subunit 16A / Q923M0* / Q96I34* / protein phosphatase 1, regulatory (inhibitor) subunit 16A*ENSDARG000000769803
BX323087.1 / O60237* / PPP1R12B* / protein phosphatase 1 regulatory subunit 12B*ENSDARG000001171552
ppp1r27b / protein phosphatase 1, regulatory subunit 27b / Q9D119* / Q86WC6* / PPP1R27* / protein phosphatase 1 regulatory subunit 27*ENSDARG000001005041
CABZ01068600.1ENSDARG000001134541
CU693479.1 / Q86WC6* / PPP1R27* / protein phosphatase 1 regulatory subunit 27*ENSDARG000001168061
nrarpb / Q7T3X9 / NOTCH regulated ankyrin repeat protein bENSDARG000000189580
Q7T3Y0 / nrarpa / NOTCH regulated ankyrin repeat protein a / NRARP* / Q7Z6K4* / Q91ZA8* / NOTCH regulated ankyrin repeat protein* / Notch-regulated ankyrin repeat-containing protein *ENSDARG000000914190


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR002110  Ankyrin repeat
 IPR020683  Ankyrin repeat-containing domain
 IPR028320  RelA-associated inhibitor


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006915 apoptotic process IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0008134 transcription factor binding IEA


Pathways (from Reactome)
Pathway description
Regulation of TP53 Activity through Association with Co-factors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000035559 tp53 / P79734 / tumor protein p53 / Trp53* / P04637* / P02340* / transformation related protein 53*  / complex / reaction
 ENSDARG00000017953 tp73 / tumor protein p73 / Trp73* / Q9JJP2* / O15350* / transformation related protein 73*  / complex / reaction






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr