ENSDARG00000013861


Danio rerio

Features
Gene ID: ENSDARG00000013861
  
Biological name :armc1
  
Synonyms : armadillo repeat containing 1 / armc1
  
Possible biological names infered from orthology : Mus musculus armadillo repeat containing 1 (Armc1), transcript variant 2, mRNA. / Q9D7A8 / Q9NVT9
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 24701780
Gene end: 24724284
  
Corresponding Affymetrix probe sets: Dr.26140.1.A1_at (Zebrafish Array)   NM_001008609_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000107149
Ensembl peptide - ENSDARP00000009420
NCBI entrez gene - 494066     See in Manteia.
RefSeq - NM_001008609
RefSeq Peptide - NP_001008609
swissprot - A8KBM7
swissprot - Q5PR58
ZFIN ID - ZDB-GENE-041212-33
Ensembl - ENSDARG00000013861
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ARMC1ENSGALG00000036567Gallus gallus
 ARMC1ENSG00000104442Homo sapiens
 Armc1ENSMUSG00000027599Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
armc1l / armadillo repeat containing 1, likeENSDARG0000002088753


Protein motifs (from Interpro)
Interpro ID Name
 IPR006121  Heavy metal-associated domain, HMA
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR016617  Uncharacterised conserved protein UCP013899, metal binding


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030001 metal ion transport IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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