ENSGALG00000036567


Gallus gallus

Features
Gene ID: ENSGALG00000036567
  
Biological name :ARMC1
  
Synonyms : Armadillo repeat-containing protein 1 / ARMC1 / Q5ZMQ0
  
Possible biological names infered from orthology : armadillo repeat containing 1 / Mus musculus armadillo repeat containing 1 (Armc1), transcript variant 2, mRNA. / Q9D7A8 / Q9NVT9
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 115183808
Gene end: 115214033
  
Corresponding Affymetrix probe sets: Gga.9825.1.S1_at (Chicken Array)   Gga.9825.2.S1_s_at (Chicken Array)   GgaAffx.11437.1.S1_at (Chicken Array)   GgaAffx.9875.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000048636
Ensembl peptide - ENSGALP00000045725
NCBI entrez gene - 429406     See in Manteia.
RefSeq - XM_015282727
RefSeq - NM_001031573
RefSeq - XM_015282726
RefSeq Peptide - NP_001026744
swissprot - Q5ZMQ0
swissprot - A0A1D5P7E7
Ensembl - ENSGALG00000036567
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 armc1ENSDARG00000013861Danio rerio
 ARMC1ENSG00000104442Homo sapiens
 Armc1ENSMUSG00000027599Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000225  Armadillo
 IPR006121  Heavy metal-associated domain, HMA
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR016617  Uncharacterised conserved protein UCP013899, metal binding


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030001 metal ion transport IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005739 mitochondrion IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr