ENSDARG00000016260


Danio rerio

Features
Gene ID: ENSDARG00000016260
  
Biological name :fxr2
  
Synonyms : fragile X mental retardation, autosomal homolog 2 / fxr2
  
Possible biological names infered from orthology : FMR1 autosomal homolog 2 / P51116
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 22718251
Gene end: 22761090
  
Corresponding Affymetrix probe sets: Dr.17084.2.S1_a_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000113332
Ensembl peptide - ENSDARP00000004667
Ensembl peptide - ENSDARP00000142685
swissprot - A0A1D5NS75
swissprot - E9QG02
swissprot - F1RC77
ZFIN ID - ZDB-GENE-040426-943
Ensembl - ENSDARG00000016260
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FXR2ENSG00000129245Homo sapiens
 Fxr2ENSMUSG00000018765Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fxr1 / fragile X mental retardation, autosomal homolog 1 / Q61584* / P51114* / FMR1 autosomal homolog 1* / Fragile X mental retardation syndrome-related protein 1 *ENSDARG0000002296859
fmr1 / fragile X mental retardation 1 / Q06787*ENSDARG0000003743343


Protein motifs (from Interpro)
Interpro ID Name
 IPR004087  K Homology domain
 IPR004088  K Homology domain, type 1
 IPR008395  Agenet-like domain
 IPR022034  Fragile X-related 1 protein, C-terminal core
 IPR032172  Fragile X-related 1 protein, C-terminal region 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0017148 negative regulation of translation IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005844 polysome IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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