ENSDARG00000016769


Danio rerio

Features
Gene ID: ENSDARG00000016769
  
Biological name :sgtb
  
Synonyms : sgtb / small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
  
Possible biological names infered from orthology : Q8VD33 / Q96EQ0 / small glutamine rich tetratricopeptide repeat containing beta / Small glutamine-rich tetratricopeptide repeat-containing protein beta
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 15381972
Gene end: 15405564
  
Corresponding Affymetrix probe sets: Dr.14580.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000013325
NCBI entrez gene - 431772     See in Manteia.
RefSeq - NM_001002225
RefSeq Peptide - NP_001002225
swissprot - F1R7L2
ZFIN ID - ZDB-GENE-040704-72
Ensembl - ENSDARG00000016769
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SGTBENSGALG00000014768Gallus gallus
 SGTBENSG00000197860Homo sapiens
 SgtbENSMUSG00000042743Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sgta / small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha / O43765* / Q8BJU0* / small glutamine rich tetratricopeptide repeat containing alpha*ENSDARG0000001994154
ttc12 / tetratricopeptide repeat domain 12 / Q8BW49* / Q9H892*ENSDARG0000005689618
stub1 / STIP1 homology and U-Box containing protein 1 / Q9UNE7* / Q9WUD1*ENSDARG000000452289


Protein motifs (from Interpro)
Interpro ID Name
 IPR001440  Tetratricopeptide repeat 1
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR013105  Tetratricopeptide repeat 2
 IPR019734  Tetratricopeptide repeat
 IPR032374  SGTA, homodimerisation domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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