ENSDARG00000056896


Danio rerio

Features
Gene ID: ENSDARG00000056896
  
Biological name :ttc12
  
Synonyms : tetratricopeptide repeat domain 12 / ttc12
  
Possible biological names infered from orthology : Q8BW49 / Q9H892
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 21947117
Gene end: 21981546
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000128846
NCBI entrez gene - 563791     See in Manteia.
RefSeq - XM_009291656
RefSeq - NM_001202496
RefSeq Peptide - NP_001189425
swissprot - X1WF42
ZFIN ID - ZDB-GENE-071016-4
Ensembl - ENSDARG00000056896
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TTC12ENSG00000149292Homo sapiens
 Ttc12ENSMUSG00000040219Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sgtb / small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta / Q96EQ0* / Q8VD33* / small glutamine rich tetratricopeptide repeat containing beta* / Small glutamine-rich tetra...ENSDARG000000167698
sgta / small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha / O43765* / Q8BJU0* / small glutamine rich tetratricopeptide repeat containing alpha*ENSDARG000000199418
stub1 / STIP1 homology and U-Box containing protein 1 / Q9UNE7* / Q9WUD1*ENSDARG000000452284


Protein motifs (from Interpro)
Interpro ID Name
 IPR011989  Armadillo-like helical
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR016024  Armadillo-type fold
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr