ENSDARG00000017240


Danio rerio

Features
Gene ID: ENSDARG00000017240
  
Biological name :traf5
  
Synonyms : Tnf receptor-associated factor 5 / traf5
  
Possible biological names infered from orthology : O00463
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 38301365
Gene end: 38322451
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000040549
Ensembl peptide - ENSDARP00000117146
swissprot - F1QV00
swissprot - F6NY94
ZFIN ID - ZDB-GENE-071120-3
Ensembl - ENSDARG00000017240
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRAF5ENSGALG00000009864Gallus gallus
 TRAF5ENSG00000082512Homo sapiens
 Traf5ENSMUSG00000026637Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
traf3 / TNF receptor-associated factor 3 / Q13114* / Q60803*ENSDARG0000002200028
traf2a / Tnf receptor-associated factor 2a / TRAF2* / P39429* / Q12933* / TNF receptor associated factor 2*ENSDARG0000003017323
traf2b / Tnf receptor-associated factor 2bENSDARG0000010103623
traf6 / Q6IWL4 / TNF receptor-associated factor 6 / P70196* / Q9Y4K3*ENSDARG0000002805822
traf4b / tnf receptor-associated factor 4bENSDARG0000003896422
traf4a / tnf receptor-associated factor 4a / TRAF4* / Q61382* / Q9BUZ4* / TNF receptor associated factor 4*ENSDARG0000000396320
traf1 / TNF receptor-associated factor 1 / P39428* / Q13077*ENSDARG0000006948220
unm_sa808 / un-named sa808 / TRAF2* / Q12933* / TNF receptor associated factor 2*ENSDARG000000783785


Protein motifs (from Interpro)
Interpro ID Name
 IPR001293  Zinc finger, TRAF-type
 IPR001841  Zinc finger, RING-type
 IPR002083  MATH/TRAF domain
 IPR008974  TRAF-like
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR018957  Zinc finger, C3HC4 RING-type
 IPR027130  TNF receptor-associated factor 5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0042981 regulation of apoptotic process IEA
 biological_processGO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signaling IEA
 molecular_functionGO:0005164 tumor necrosis factor receptor binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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