ENSDARG00000018264


Danio rerio

Features
Gene ID: ENSDARG00000018264
  
Biological name :trim101
  
Synonyms : trim101 / tripartite motif containing 101
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 17454691
Gene end: 17470146
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000011133
NCBI entrez gene - 445187     See in Manteia.
RefSeq - NM_001003581
RefSeq Peptide - NP_001003581
swissprot - F1QQV8
ZFIN ID - ZDB-GENE-040801-100
Ensembl - ENSDARG00000018264
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
trim55a / tripartite motif containing 55a / Q9BYV6* / TRIM55* / tripartite motif containing 55*ENSDARG0000002959641
trim55b / tripartite motif containing 55b / Q9BYV6* / TRIM55* / tripartite motif containing 55*ENSDARG0000005815839
trim63b / tripartite motif containing 63b / Q969Q1* / TRIM63* / tripartite motif containing 63*ENSDARG0000008668537
trim63a / tripartite motif containing 63a / Q969Q1* / TRIM63* / tripartite motif containing 63*ENSDARG0000002802736
trim54 / tripartite motif containing 54 / Q9BYV2* / Q9ERP3* / Tripartite motif-containing protein 54 *ENSDARG0000002990736
trim36 / tripartite motif containing 36 / Q80WG7* / Q9NQ86* / E3 ubiquitin-protein ligase Trim36 *ENSDARG0000006279425
mid2 / midline 2 / Q9UJV3*ENSDARG0000003487124
mid1 / midline 1 / O15344* / O70583* / E3 ubiquitin-protein ligase Midline-1 *ENSDARG0000006048224
trim46a / tripartite motif containing 46a / TRIM46* / Q7TNM2* / Q7Z4K8* / tripartite motif containing 46*ENSDARG0000001236722
trim46b / tripartite motif containing 46b / TRIM46* / Q7TNM2* / Q7Z4K8* / tripartite motif containing 46*ENSDARG0000005864921
trim9 / tripartite motif containing 9 / Q8C7M3* / Q9C026* / E3 ubiquitin-protein ligase TRIM9 *ENSDARG0000003912320
TRIM67 / tripartite motif containing 67 / Q6ZTA4*ENSDARG0000010878719
fsd1l / fibronectin type III and SPRY domain containing 1-like / Q8BYN5* / Q9BXM9* / Mus musculus fibronectin type III and SPRY domain containing 1-like (Fsd1l), transcript variant 3, mRNA.*ENSDARG0000005943211
fsd1 / Q1LY10 / fibronectin type III and SPRY domain containing 1 / Q9BTV5*ENSDARG0000006201711


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017903  COS domain
 IPR017907  Zinc finger, RING-type, conserved site
 IPR027370  RING-type zinc-finger, LisH dimerisation motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr