ENSDARG00000018721


Danio rerio

Features
Gene ID: ENSDARG00000018721
  
Biological name :npnt
  
Synonyms : nephronectin / npnt
  
Possible biological names infered from orthology : Q6UXI9 / Q91V88
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 50085440
Gene end: 50188006
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000020901
Ensembl peptide - ENSDARP00000139806
Ensembl peptide - ENSDARP00000132626
Ensembl peptide - ENSDARP00000122290
NCBI entrez gene - 563273     See in Manteia.
swissprot - B8A5G5
swissprot - B8A5G4
swissprot - A0A0R4IGU5
swissprot - H2DL87
swissprot - H2DL88
ZFIN ID - ZDB-GENE-090312-201
Ensembl - ENSDARG00000018721
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NPNTENSGALG00000043555Gallus gallus
 NPNTENSG00000168743Homo sapiens
 NpntENSMUSG00000040998Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nephronectin / NPNT (1 of many) / NPNT* / Q6UXI9*ENSDARG0000010079741
egfl6 / EGF-like-domain, multiple 6 / Q8IUX8* / Q9JJZ5* / Epidermal growth factor-like protein 6 *ENSDARG0000004595835
si:ch211-194g2.4 / EGFL7* / Q9UHF1* / EGF like domain multiple 7*ENSDARG0000009464816
egfl7 / EGF-like-domain, multiple 7 / Q9UHF1*ENSDARG0000010065711


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000742  EGF-like domain
 IPR000998  MAM domain
 IPR001881  EGF-like calcium-binding domain
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR013032  EGF-like, conserved site
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR018097  EGF-like calcium-binding, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003171 atrioventricular valve development IMP
 biological_processGO:0060347 heart trabecula formation IMP
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000114 heart heart straight , abnormal
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 ZFA:0001094 whole organism whole organism dead , abnormal
Show

 ZFA:0001315 atrioventricular canal atrioventricular canal endocardium increased length , abnormal
atrioventricular canal increased length , abnormal
atrioventricular canal cardiac muscle cell increased amount , abnormal
atrioventricular canal endocardium decreased length , abnormal
Show

 ZFA:0001318 cardiac jelly cardiac jelly increased volume , abnormal
cardiac jelly mislocalised , abnormal
cardiac jelly decreased volume , abnormal
Show

 ZFA:0001320 endocardium endocardium far from myocardium , abnormal
Show

 ZFA:0005059 trabecular layer trabecular layer morphology , abnormal
Show

 ZFA:0005064 atrioventricular valve atrioventricular valve morphology , abnormal
atrioventricular valve increased length , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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