ENSDARG00000019311


Danio rerio

Features
Gene ID: ENSDARG00000019311
  
Biological name :fbxo30b
  
Synonyms : F-box protein 30b / fbxo30b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 1561931
Gene end: 1571682
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000025967
NCBI entrez gene - 393404     See in Manteia.
RefSeq - NM_200432
RefSeq Peptide - NP_956726
swissprot - F1QPK7
ZFIN ID - ZDB-GENE-040426-1125
Ensembl - ENSDARG00000019311
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fbxo30a / F-box protein 30a / Q8TB52* / FBXO30* / Q8BJL1* / F-box protein 30* / F-box only protein 30 *ENSDARG0000005856145
fbxo40.2 / F-box protein 40, tandem duplicate 2 / FBXO40* / P62932* / Q9UH90* / F-box protein 40* / Mus musculus F-box protein 40 (Fbxo40), transcript variant 1, mRNA.*ENSDARG0000009111927
fbxo40.1 / F-box protein 40, tandem duplicate 1 / FBXO40* / P62932* / Q9UH90* / F-box protein 40* / Mus musculus F-box protein 40 (Fbxo40), transcript variant 1, mRNA.*ENSDARG0000006977526


Protein motifs (from Interpro)
Interpro ID Name
 IPR001293  Zinc finger, TRAF-type
 IPR001810  F-box domain
 IPR008974  TRAF-like
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR031890  F-box only protein 30/40


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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