ENSDARG00000091119


Danio rerio

Features
Gene ID: ENSDARG00000091119
  
Biological name :fbxo40.2
  
Synonyms : F-box protein 40, tandem duplicate 2 / fbxo40.2
  
Possible biological names infered from orthology : F-box protein 40 / FBXO40 / Mus musculus F-box protein 40 (Fbxo40), transcript variant 1, mRNA. / P62932 / Q9UH90
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 22731566
Gene end: 22737228
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000125994
NCBI entrez gene - 566344     See in Manteia.
RefSeq - XM_021473425
RefSeq - XM_689616
swissprot - I3ISU9
ZFIN ID - ZDB-GENE-120215-105
Ensembl - ENSDARG00000091119
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FBXO40ENSGALG00000013999Gallus gallus
 FBXO40ENSG00000163833Homo sapiens
 Fbxo40ENSMUSG00000047746Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fbxo40.1 / F-box protein 40, tandem duplicate 1 / FBXO40* / P62932* / Q9UH90* / F-box protein 40* / Mus musculus F-box protein 40 (Fbxo40), transcript variant 1, mRNA.*ENSDARG0000006977546
fbxo30b / F-box protein 30bENSDARG0000001931133
fbxo30a / F-box protein 30a / Q8TB52* / FBXO30* / Q8BJL1* / F-box protein 30* / F-box only protein 30 *ENSDARG0000005856132


Protein motifs (from Interpro)
Interpro ID Name
 IPR001293  Zinc finger, TRAF-type
 IPR001810  F-box domain
 IPR008974  TRAF-like
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR031890  F-box only protein 30/40


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA


Pathways (from Reactome)
Pathway description
Neddylation
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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