ENSDARG00000020000


Danio rerio

Features
Gene ID: ENSDARG00000020000
  
Biological name :sh3bp4a
  
Synonyms : Q1LVQ2 / sh3bp4a / SH3-domain binding protein 4a
  
Possible biological names infered from orthology : Q921I6 / Q9P0V3 / SH3BP4 / SH3 domain binding protein 4
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 13886821
Gene end: 13944737
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000007868
Ensembl peptide - ENSDARP00000096489
Ensembl peptide - ENSDARP00000110108
NCBI entrez gene - 403082     See in Manteia.
RefSeq - NM_001316330
RefSeq Peptide - NP_001303259
swissprot - F1Q812
swissprot - Q1LVQ2
ZFIN ID - ZDB-GENE-040303-3
Ensembl - ENSDARG00000020000
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SH3BP4ENSGALG00000004140Gallus gallus
 Q9P0V3ENSG00000130147Homo sapiens
 Q921I6ENSMUSG00000036206Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sh3bp4 / SH3-domain binding protein 4 / Q921I6* / Q9P0V3*ENSDARG0000003010471
macc1 / metastasis associated in colon cancer 1 / Q6ZN28* / MACC1, MET transcriptional regulator*ENSDARG0000004071734


Protein motifs (from Interpro)
Interpro ID Name
 IPR000906  ZU5 domain
 IPR001452  SH3 domain
 IPR035455  SH3 domain-binding protein 4
 IPR035456  SH3BP4, SH3 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006897 endocytosis IEA
 biological_processGO:0008285 negative regulation of cell proliferation ISS
 biological_processGO:0010508 positive regulation of autophagy ISS
 biological_processGO:0030308 negative regulation of cell growth ISS
 biological_processGO:0032007 negative regulation of TOR signaling ISS
 biological_processGO:0034260 negative regulation of GTPase activity ISS
 biological_processGO:0050790 regulation of catalytic activity ISS
 biological_processGO:0061462 protein localization to lysosome ISS
 biological_processGO:0071230 cellular response to amino acid stimulus ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005905 clathrin-coated pit IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030136 clathrin-coated vesicle IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 molecular_functionGO:0005092 GDP-dissociation inhibitor activity ISS
 molecular_functionGO:0017016 Ras GTPase binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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