ENSDARG00000040717


Danio rerio

Features
Gene ID: ENSDARG00000040717
  
Biological name :macc1
  
Synonyms : macc1 / metastasis associated in colon cancer 1
  
Possible biological names infered from orthology : MACC1, MET transcriptional regulator / Q6ZN28
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 19637384
Gene end: 19677375
  
Corresponding Affymetrix probe sets: Dr.13671.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000146656
Ensembl peptide - ENSDARP00000151857
Ensembl peptide - ENSDARP00000114832
Ensembl peptide - ENSDARP00000146541
NCBI entrez gene - 558777     See in Manteia.
RefSeq - NM_001199766
RefSeq Peptide - NP_001186695
swissprot - E7FG38
ZFIN ID - ZDB-GENE-091006-3
Ensembl - ENSDARG00000040717
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MACC1ENSGALG00000010868Gallus gallus
 MACC1ENSG00000183742Homo sapiens
 Macc1ENSMUSG00000041886Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sh3bp4 / SH3-domain binding protein 4 / Q921I6* / Q9P0V3*ENSDARG0000003010440
Q1LVQ2 / sh3bp4a / SH3-domain binding protein 4a / SH3BP4* / Q9P0V3* / Q921I6* / SH3 domain binding protein 4*ENSDARG0000002000039


Protein motifs (from Interpro)
Interpro ID Name
 IPR000906  ZU5 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0048701 embryonic cranial skeleton morphogenesis IMP
 cellular_componentGO:0005737 cytoplasm IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000107 eye eye hypoplastic , abnormal
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 ZFA:0001114 head head hypoplastic , abnormal
head anterior side collapsed , abnormal
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 ZFA:0001205 Meckel s cartilage Meckels cartilage decreased size , abnormal
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 ZFA:0001321 neurocranial trabecula neurocranial trabecula decreased size , abnormal
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 ZFA:0001399 palatoquadrate cartilage palatoquadrate cartilage decreased size , abnormal
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 ZFA:0001405 ethmoid cartilage ethmoid cartilage absent , abnormal
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 ZFA:0001458 cranial cartilage cranial cartilage absent , abnormal
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 ZFA:0001516 ceratobranchial cartilage ceratobranchial cartilage absent , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr