ENSDARG00000020850


Danio rerio

Features
Gene ID: ENSDARG00000020850
  
Biological name :eef1a1l1
  
Synonyms : eef1a1l1 / eukaryotic translation elongation factor 1 alpha 1, like 1 / Q92005
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 43119014
Gene end: 43137740
  
Corresponding Affymetrix probe sets: Dr.261.1.S1_at (Zebrafish Array)   NM_131263_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000148761
Ensembl peptide - ENSDARP00000156411
Ensembl peptide - ENSDARP00000006339
Ensembl peptide - ENSDARP00000131316
NCBI entrez gene - 30516     See in Manteia.
RefSeq - NM_131263
RefSeq Peptide - NP_571338
swissprot - A0A0R4IE10
swissprot - Q92005
ZFIN ID - ZDB-GENE-990415-52
Ensembl - ENSDARG00000020850
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
eef1a1a / eukaryotic translation elongation factor 1 alpha 1a / EEF1A1* / P10126* / P68104* / Elongation factor 1-alpha 1 * / eukaryotic translation elongation factor 1 alpha 1*ENSDARG0000003950291
eef1a1b / eukaryotic translation elongation factor 1 alpha 1b / EEF1A1* / P10126* / P68104* / Elongation factor 1-alpha 1 * / eukaryotic translation elongation factor 1 alpha 1*ENSDARG0000006995191
eef1a2 / eukaryotic translation elongation factor 1 alpha 2 / P62631* / Q05639* / Elongation factor 1-alpha 2 *ENSDARG0000000683888
si:dkey-37o8.1ENSDARG0000007172768
CABZ01101996.1ENSDARG0000010999611


Protein motifs (from Interpro)
Interpro ID Name
 IPR000795  Transcription factor, GTP-binding domain
 IPR004160  Translation elongation factor EFTu/EF1A, C-terminal
 IPR004161  Translation elongation factor EFTu-like, domain 2
 IPR004539  Translation elongation factor EF1A, eukaryotic/archaeal
 IPR009000  Translation protein, beta-barrel domain superfamily
 IPR009001  Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR031157  Tr-type G domain, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0006414 translational elongation IEA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003746 translation elongation factor activity IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000084 yolk yolk circular , abnormal
Show

 ZFA:0000107 eye eye decreased size , abnormal
Show

 ZFA:0000282 sensory system sensory system quality , abnormal
Show

 ZFA:0001094 whole organism whole organism necrotic , abnormal
Show

 ZFA:0001114 head head decreased size , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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