ENSDARG00000071727


Danio rerio

Features
Gene ID: ENSDARG00000071727
  
Biological name :si:dkey-37o8.1
  
Synonyms : si:dkey-37o8.1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 10898671
Gene end: 10901351
  
Corresponding Affymetrix probe sets: Dr.15108.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000097050
NCBI entrez gene - 407641     See in Manteia.
RefSeq - NM_001163994
RefSeq Peptide - NP_001157466
swissprot - F1QQW9
ZFIN ID - ZDB-GENE-030131-5667
Ensembl - ENSDARG00000071727
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
eef1a2 / eukaryotic translation elongation factor 1 alpha 2 / P62631* / Q05639* / Elongation factor 1-alpha 2 *ENSDARG0000000683868
eef1a1a / eukaryotic translation elongation factor 1 alpha 1a / EEF1A1* / P10126* / P68104* / Elongation factor 1-alpha 1 * / eukaryotic translation elongation factor 1 alpha 1*ENSDARG0000003950267
eef1a1b / eukaryotic translation elongation factor 1 alpha 1b / EEF1A1* / P10126* / P68104* / Elongation factor 1-alpha 1 * / eukaryotic translation elongation factor 1 alpha 1*ENSDARG0000006995167
Q92005 / eef1a1l1 / eukaryotic translation elongation factor 1 alpha 1, like 1ENSDARG0000002085065
CABZ01101996.1ENSDARG000001099968


Protein motifs (from Interpro)
Interpro ID Name
 IPR000795  Transcription factor, GTP-binding domain
 IPR004160  Translation elongation factor EFTu/EF1A, C-terminal
 IPR004161  Translation elongation factor EFTu-like, domain 2
 IPR004539  Translation elongation factor EF1A, eukaryotic/archaeal
 IPR009000  Translation protein, beta-barrel domain superfamily
 IPR009001  Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR031157  Tr-type G domain, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006414 translational elongation IEA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003746 translation elongation factor activity IBA
 molecular_functionGO:0003924 GTPase activity IBA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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