ENSDARG00000021833


Danio rerio

Features
Gene ID: ENSDARG00000021833
  
Biological name :ahr2
  
Synonyms : ahr2 / aryl hydrocarbon receptor 2
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 13046270
Gene end: 13165186
  
Corresponding Affymetrix probe sets: Dr.8105.1.S1_at (Zebrafish Array)   NM_131264_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000096540
NCBI entrez gene - 30517     See in Manteia.
RefSeq - NM_131264
RefSeq Peptide - NP_571339
swissprot - Q1LV27
ZFIN ID - ZDB-GENE-990714-16
Ensembl - ENSDARG00000021833
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AHR2ENSGALG00000023742Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ahr1b / aryl hydrocarbon receptor 1bENSDARG0000002353732
ahr1a / aryl hydrocarbon receptor 1a / AHR* / P35869* / AC019117.3* / aryl hydrocarbon receptor* / aryl hydrocarbon receptor isoform 2 *ENSDARG0000002004626
ahrrb / aryl-hydrocarbon receptor repressor b / AHRR* / A9YTQ3* / aryl-hydrocarbon receptor repressor*ENSDARG0000005261815
CABZ01114318.1 / AHRR* / A9YTQ3* / aryl-hydrocarbon receptor repressor*ENSDARG000000997029


Protein motifs (from Interpro)
Interpro ID Name
 IPR000014  PAS domain
 IPR001610  PAC motif
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain
 IPR013655  PAS fold-3
 IPR013767  PAS fold
 IPR033348  Aryl hydrocarbon receptor


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IMP
 biological_processGO:0009410 response to xenobiotic stimulus IPI
 biological_processGO:0009636 response to toxic substance IMP
 biological_processGO:0030522 intracellular receptor signaling pathway IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IPI
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IDA
 biological_processGO:0071407 cellular response to organic cyclic compound IMP
 biological_processGO:0071466 cellular response to xenobiotic stimulus IMP
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0034753 nuclear aryl hydrocarbon receptor complex IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0004874 aryl hydrocarbon receptor activity IDA
 molecular_functionGO:0004879 nuclear receptor activity IDA
 molecular_functionGO:0043565 sequence-specific DNA binding IPI
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000014 dorsal aorta dorsal aorta amount , ameliorated
dorsal aorta decreased amount , abnormal
dorsal aorta absent , abnormal
dorsal aorta increased amount , abnormal
Show

 ZFA:0000037 anatomical structure anatomical structure amount , ameliorated
anatomical structure increased amount , abnormal
Show

 ZFA:0000054 pericardium pericardium edematous , abnormal
pericardium edematous , ameliorated
Show

 ZFA:0000107 eye eye increased amount , abnormal
eye absent , abnormal
Show

 ZFA:0000108 fin fin malformed , abnormal
Show

 ZFA:0000191 dentary dentary structure , abnormal
Show

 ZFA:0000270 maxilla maxilla structure , abnormal
Show

 ZFA:0000354 gill gill malformed , abnormal
Show

 ZFA:0000368 integument integument amount , ameliorated
Show

 ZFA:0000477 posterior cardinal vein posterior cardinal vein amount , ameliorated
posterior cardinal vein decreased amount , abnormal
posterior cardinal vein absent , abnormal
Show

 ZFA:0000555 opercular flap opercular flap decreased size , abnormal
Show

 ZFA:0000567 premaxilla premaxilla structure , abnormal
Show

 ZFA:0000691 supraorbital bone supraorbital bone decreased size , abnormal
Show

 ZFA:0001052 primordial hindbrain channel primordial hindbrain channel increased amount , abnormal
Show

 ZFA:0001054 lateral dorsal aorta lateral dorsal aorta amount , ameliorated
lateral dorsal aorta decreased amount , abnormal
lateral dorsal aorta absent , abnormal
Show

 ZFA:0001094 whole organism whole organism decreased fertility , abnormal
whole organism decreased amount , abnormal
Show

 ZFA:0001205 Meckel s cartilage Meckels cartilage decreased length , abnormal
Meckels cartilage increased angle to ethmoid cartilage , abnormal
Show

 ZFA:0001227 mandibular arch skeleton mandibular arch skeleton morphology , abnormal
mandibular arch skeleton increased length , abnormal
Show

 ZFA:0001285 intersegmental vessel intersegmental vessel amount , ameliorated
intersegmental vessel decreased amount , abnormal
intersegmental vessel absent , abnormal
Show

 ZFA:0001338 intestine intestine vasculature amount , ameliorated
intestine vasculature increased amount , abnormal
Show

 ZFA:0001405 ethmoid cartilage ethmoid cartilage increased length , abnormal
Show

 ZFA:0001410 orbital region orbital region decreased size , abnormal
Show

 ZFA:0001516 ceratobranchial cartilage ceratobranchial cartilage morphology , abnormal
Show

 ZFA:0001580 neurocranium neurocranium structure , abnormal
Show

 ZFA:0005000 basal communicating artery basal communicating artery absent , abnormal
Show

 ZFA:0005001 posterior communicating artery posterior communicating artery absent , abnormal
Show

 ZFA:0005002 basilar artery basilar artery absent , abnormal
Show

 ZFA:0005020 central artery central artery amount , ameliorated
central artery increased amount , abnormal
Show

 ZFA:0005024 trunk vasculature trunk vasculature absent , abnormal
trunk vasculature increased amount , abnormal
Show

 ZFA:0005025 dorsal longitudinal anastomotic vessel dorsal longitudinal anastomotic vessel amount , ameliorated
dorsal longitudinal anastomotic vessel decreased amount , abnormal
dorsal longitudinal anastomotic vessel absent , abnormal
dorsal longitudinal anastomotic vessel increased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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