ENSDARG00000023537


Danio rerio

Features
Gene ID: ENSDARG00000023537
  
Biological name :ahr1b
  
Synonyms : ahr1b / aryl hydrocarbon receptor 1b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 12979213
Gene end: 13042992
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000035291
NCBI entrez gene - 554265     See in Manteia.
RefSeq - NM_001024816
RefSeq Peptide - NP_001019987
swissprot - Q4U3K9
ZFIN ID - ZDB-GENE-050922-1
Ensembl - ENSDARG00000023537
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AHR1BENSGALG00000004322Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ahr2 / aryl hydrocarbon receptor 2ENSDARG0000002183335
ahr1a / aryl hydrocarbon receptor 1a / AHR* / P35869* / AC019117.3* / aryl hydrocarbon receptor* / aryl hydrocarbon receptor isoform 2 *ENSDARG0000002004631
ahrrb / aryl-hydrocarbon receptor repressor b / AHRR* / A9YTQ3* / aryl-hydrocarbon receptor repressor*ENSDARG0000005261818
CABZ01114318.1 / AHRR* / A9YTQ3* / aryl-hydrocarbon receptor repressor*ENSDARG0000009970210


Protein motifs (from Interpro)
Interpro ID Name
 IPR000014  PAS domain
 IPR001610  PAC motif
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain
 IPR013655  PAS fold-3
 IPR013767  PAS fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0009410 response to xenobiotic stimulus IBA
 biological_processGO:0030522 intracellular receptor signaling pathway IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0034751 aryl hydrocarbon receptor complex IEA
 cellular_componentGO:0034753 nuclear aryl hydrocarbon receptor complex IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0004874 aryl hydrocarbon receptor activity IDA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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