ENSDARG00000022648


Danio rerio

Features
Gene ID: ENSDARG00000022648
  
Biological name :otud3
  
Synonyms : otud3 / OTU deubiquitinase 3
  
Possible biological names infered from orthology : B1AZ99 / OTU domain-containing protein 3 / Q5T2D3
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 39611688
Gene end: 39626681
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000037518
NCBI entrez gene - 405858     See in Manteia.
RefSeq - NM_212922
RefSeq Peptide - NP_998087
swissprot - F1R341
ZFIN ID - ZDB-GENE-040426-2509
Ensembl - ENSDARG00000022648
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 OTUD3ENSGALG00000043920Gallus gallus
 OTUD3ENSG00000169914Homo sapiens
 Otud3ENSMUSG00000041161Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003323  OTU domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Ovarian tumor domain proteases
Regulation of PTEN stability and activity


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000012 central nervous system central nervous system necrotic , abnormal
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 ZFA:0000155 somite somite fused with somite , abnormal
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 ZFA:0001115 trunk trunk necrotic , abnormal
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 ZFA:0001117 post-vent region post-vent region curled , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr