ENSDARG00000023546


Danio rerio

Features
Gene ID: ENSDARG00000023546
  
Biological name :kcnn1b
  
Synonyms : kcnn1b / potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1b / si:dkey-76p7.5
  
Possible biological names infered from orthology : KCNN1 / potassium calcium-activated channel subfamily N member 1 / Q92952
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 13244371
Gene end: 13315567
  
Corresponding Affymetrix probe sets: Dr.14710.1.S1_at (Zebrafish Array)   NM_001045199_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000130450
Ensembl peptide - ENSDARP00000007813
Ensembl peptide - ENSDARP00000115554
Ensembl peptide - ENSDARP00000115684
NCBI entrez gene - 570401     See in Manteia.
RefSeq - NM_001045199
RefSeq - NM_001328106
RefSeq Peptide - NP_001038664
RefSeq Peptide - NP_001315035
swissprot - F1Q7U8
swissprot - Q1LY45
swissprot - A0A0R4IC13
swissprot - Q1LY44
ZFIN ID - ZDB-GENE-091116-41
ZFIN ID - ZDB-GENE-060503-397
Ensembl - ENSDARG00000023546
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 KCNN1ENSGALG00000031411Gallus gallus
 KCNN1ENSG00000105642Homo sapiens
 Kcnn1ENSMUSG00000002908Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
kcnn1a / potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a / KCNN1* / Q92952* / potassium calcium-activated channel subfamily N member 1*ENSDARG0000009130686
KCNN2 / si:dkey-76p7.5 / Q9H2S1* / P58390* / potassium calcium-activated channel subfamily N member 2* / potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2*ENSDARG0000001493978
kcnn3 / potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3ENSDARG0000001975367
kcnn4 / potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4 / O15554* / O89109* / potassium calcium-activated channel subfamily N member 4*ENSDARG0000008609140


Protein motifs (from Interpro)
Interpro ID Name
 IPR004178  Calmodulin-binding domain
 IPR013099  Potassium channel domain
 IPR015449  Potassium channel, calcium-activated, SK


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006813 potassium ion transport IEA
 biological_processGO:0071805 potassium ion transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005516 calmodulin binding IEA
 molecular_functionGO:0015269 calcium-activated potassium channel activity IEA
 molecular_functionGO:0016286 small conductance calcium-activated potassium channel activity IEA


Pathways (from Reactome)
Pathway description
Ca2+ activated K+ channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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