ENSDARG00000091306


Danio rerio

Features
Gene ID: ENSDARG00000091306
  
Biological name :kcnn1a
  
Synonyms : kcnn1a / potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a
  
Possible biological names infered from orthology : KCNN1 / potassium calcium-activated channel subfamily N member 1 / Q92952
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 24410494
Gene end: 24462277
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000032274
Ensembl peptide - ENSDARP00000121302
Ensembl peptide - ENSDARP00000137728
NCBI entrez gene - 563352     See in Manteia.
RefSeq - NM_001128248
RefSeq Peptide - NP_001121720
swissprot - F1QND4
swissprot - A0A0R4INU5
swissprot - F1R329
ZFIN ID - ZDB-GENE-070912-703
Ensembl - ENSDARG00000091306
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 KCNN1ENSGALG00000031411Gallus gallus
 KCNN1ENSG00000105642Homo sapiens
 Kcnn1ENSMUSG00000002908Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KCNN2 / si:dkey-76p7.5 / Q9H2S1* / P58390* / potassium calcium-activated channel subfamily N member 2* / potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2*ENSDARG0000001493946
kcnn3 / potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3ENSDARG0000001975343
kcnn1b / si:dkey-76p7.5 / potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1b / KCNN1* / Q92952* / potassium calcium-activated channel subfamily N member 1*ENSDARG0000002354622
kcnn4 / potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4 / O15554* / O89109* / potassium calcium-activated channel subfamily N member 4*ENSDARG0000008609122


Protein motifs (from Interpro)
Interpro ID Name
 IPR004178  Calmodulin-binding domain
 IPR013099  Potassium channel domain
 IPR015449  Potassium channel, calcium-activated, SK


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006813 potassium ion transport IEA
 biological_processGO:0071805 potassium ion transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0043025 neuronal cell body IBA
 molecular_functionGO:0005516 calmodulin binding IEA
 molecular_functionGO:0015269 calcium-activated potassium channel activity IEA
 molecular_functionGO:0016286 small conductance calcium-activated potassium channel activity IEA


Pathways (from Reactome)
Pathway description
Ca2+ activated K+ channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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