ENSDARG00000027310


Danio rerio

Features
Gene ID: ENSDARG00000027310
  
Biological name :lsp1
  
Synonyms : lsp1 / lymphocyte-specific protein 1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 31323970
Gene end: 31394515
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000067029
NCBI entrez gene - 100536902     See in Manteia.
RefSeq - XM_003201460
swissprot - E7EZF4
ZFIN ID - ZDB-GENE-131127-171
Ensembl - ENSDARG00000027310
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CT030188.1ENSDARG0000009938528
cald1b / caldesmon 1b / CALD1* / Q05682* / caldesmon 1*ENSDARG0000008639121


Protein motifs (from Interpro)
Interpro ID Name
 IPR006017  Caldesmon
 IPR006018  Caldesmon/lymphocyte specific protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006936 muscle contraction IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005516 calmodulin binding IEA
 molecular_functionGO:0017022 myosin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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