ENSDARG00000099385


Danio rerio

Features
Gene ID: ENSDARG00000099385
  
Biological name :CT030188.1
  
Synonyms : CT030188.1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 39410180
Gene end: 39440071
  
Corresponding Affymetrix probe sets: Dr.18245.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000133752
Ensembl peptide - ENSDARP00000152889
Ensembl peptide - ENSDARP00000141260
Ensembl peptide - ENSDARP00000137604
Ensembl peptide - ENSDARP00000137600
NCBI entrez gene - 100002400     See in Manteia.
RefSeq - XM_001338635
swissprot - A0A0G2L8Z4
swissprot - A0A0G2KYR2
swissprot - A0A0G2KYQ8
swissprot - A0A0G2KN09
Ensembl - ENSDARG00000099385
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lsp1 / lymphocyte-specific protein 1ENSDARG0000002731033
cald1b / caldesmon 1b / CALD1* / Q05682* / caldesmon 1*ENSDARG0000008639118


Protein motifs (from Interpro)
Interpro ID Name
 IPR002211  Lymphocyte-specific protein
 IPR006017  Caldesmon
 IPR006018  Caldesmon/lymphocyte specific protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006936 muscle contraction IEA
 biological_processGO:0007165 signal transduction IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0004871 obsolete signal transducer activity IEA
 molecular_functionGO:0005516 calmodulin binding IEA
 molecular_functionGO:0017022 myosin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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